Analysis of interatomic Contacts of Structural Units in PDB entry:
2KNE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2KNE entry

There are 2 chains in PDB entry 2KNE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1LYS 148
B
LEU 1086SER 1113
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2KNE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
5 20Right-handed alpha
Helix 2
2
A
28 39Right-handed alpha
Helix 3
3
A
45 56Right-handed alpha
Helix 4
4
A
64 75Right-handed alpha
Helix 5
5
A
82 91Right-handed alpha
Helix 6
6
A
101 111Right-handed alpha
Helix 7
7
A
118 129Right-handed alpha
Helix 8
8
A
137 145Right-handed alpha
Helix 9
108
B
1089 1110Right-handed alpha
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There are no sheets in PDB entry 2KNE

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