Analysis of interatomic Contacts of Structural Units in PDB entry:
2NTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NTZ entry

There are 6 chains in PDB entry 2NTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
Y
C 24 A 39
W
T 2 G 17
E
C 24 A 39
U
T 2 G 17
A
GLN 144LYS 332
B
SER 150SER 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2NTZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
150 164Right-handed alpha
Helix 2
2
A
167 175Right-handed alpha
Helix 3
3
A
178 190Right-handed alpha
Helix 4
4
A
192 198Right-handed alpha
Helix 5
5
A
201 205Right-handed 310
Helix 6
6
A
206 219Right-handed alpha
Helix 7
7
A
225 240Right-handed alpha
Helix 8
8
A
252 261Right-handed alpha
Helix 9
9
A
264 269Right-handed alpha
Helix 10
10
A
308 326Right-handed alpha
Helix 11
11
B
150 160Right-handed alpha
Helix 12
12
B
167 175Right-handed alpha
Helix 13
13
B
178 189Right-handed alpha
Helix 14
14
B
192 199Right-handed alpha
Helix 15
15
B
201 205Right-handed 310
Helix 16
16
B
206 219Right-handed alpha
Helix 17
17
B
223 242Right-handed alpha
Helix 18
18
B
248 267Right-handed alpha
Helix 19
19
B
308 325Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2NTZ.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
278 280first strand
Strand 2
A
290 294anti-parallel
Strand 3
A
301 305anti-parallel
Strand 4
B
299 305anti-parallel
Strand 5
B
290 296anti-parallel
Strand 6
B
277 278anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il