Analysis of interatomic Contacts of Structural Units in PDB entry:
2NVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NVX entry

There are 13 chains in PDB entry 2NVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
A 1 A 10
N
C 1 G 14
T
C 1 T 28
A
GLY 3ILE 1445
B
ASP 20ARG 1222
C
GLU 3ASP 268
E
ASP 2MET 215
F
THR 68LEU 155
H
MET 1ARG 146
I
THR 2GLN 120
J
MET 1PRO 65
K
MET 1LEU 114
L
ALA 25ARG 70
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 2NVX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
23 31Right-handed alpha
Helix 2
2
A
42 46Right-handed 310
Helix 3
3
A
95 104Right-handed alpha
Helix 4
4
A
121 125Right-handed 310
Helix 5
5
A
130 139Right-handed alpha
Helix 6
6
A
203 213Right-handed alpha
Helix 7
7
A
215 220Right-handed alpha
Helix 8
8
A
230 235Right-handed alpha
Helix 9
9
A
243 247Right-handed 310
Helix 10
10
A
261 274Right-handed alpha
Helix 11
11
A
276 281Right-handed alpha
Helix 12
12
A
289 301Right-handed alpha
Helix 13
13
A
325 330Right-handed alpha
Helix 14
14
A
334 340Right-handed alpha
Helix 15
15
A
367 374Right-handed alpha
Helix 16
16
A
384 395Right-handed alpha
Helix 17
17
A
474 479Right-handed alpha
Helix 18
18
A
494 503Right-handed alpha
Helix 19
19
A
507 510Right-handed 310
Helix 20
20
A
525 535Right-handed alpha
Helix 21
21
A
543 553Right-handed alpha
Helix 22
22
A
574 579Right-handed alpha
Helix 23
23
A
628 637Right-handed alpha
Helix 24
24
A
638 659Right-handed alpha
Helix 25
25
A
665 669Right-handed 310
Helix 26
26
A
672 698Right-handed alpha
Helix 27
27
A
709 735Right-handed alpha
Helix 28
28
A
741 750Right-handed alpha
Helix 29
29
A
754 763Right-handed alpha
Helix 30
30
A
809 846Right-handed alpha
Helix 31
31
A
867 871Right-handed 310
Helix 32
32
A
889 898Right-handed alpha
Helix 33
33
A
915 920Right-handed alpha
Helix 34
34
A
928 947Right-handed alpha
Helix 35
35
A
959 971Right-handed alpha
Helix 36
36
A
982 994Right-handed alpha
Helix 37
37
A
995 997Right-handed 310
Helix 38
38
A
1004 1016Right-handed alpha
Helix 39
39
A
1027 1034Right-handed alpha
Helix 40
40
A
1038 1057Right-handed alpha
Helix 41
41
A
1063 1078Right-handed alpha
Helix 42
42
A
1097 1105Right-handed alpha
Helix 43
43
A
1127 1139Right-handed alpha
Helix 44
44
A
1200 1205Right-handed alpha
Helix 45
45
A
1208 1218Right-handed alpha
Helix 46
46
A
1258 1263Right-handed alpha
Helix 47
47
A
1264 1266Right-handed 310
Helix 48
48
A
1312 1317Right-handed alpha
Helix 49
49
A
1331 1340Right-handed alpha
Helix 50
50
A
1340 1358Right-handed alpha
Helix 51
51
A
1364 1377Right-handed alpha
Helix 52
52
A
1395 1401Right-handed alpha
Helix 53
53
A
1404 1415Right-handed alpha
Helix 54
54
A
1423 1430Right-handed alpha
Helix 55
55
A
1436 1441Right-handed 310
Helix 56
56
B
27 29Right-handed 310
Helix 57
57
B
30 40Right-handed alpha
Helix 58
58
B
45 57Right-handed alpha
Helix 59
59
B
58 64Right-handed alpha
Helix 60
60
B
113 121Right-handed alpha
Helix 61
61
B
185 192Right-handed alpha
Helix 62
62
B
282 290Right-handed alpha
Helix 63
63
B
296 302Right-handed alpha
Helix 64
64
B
307 319Right-handed alpha
Helix 65
65
B
326 333Right-handed alpha
Helix 66
66
B
348 359Right-handed alpha
Helix 67
67
B
371 390Right-handed alpha
Helix 68
68
B
400 402Right-handed 310
Helix 69
69
B
408 436Right-handed alpha
Helix 70
70
B
450 463Right-handed alpha
Helix 71
71
B
473 477Right-handed 310
Helix 72
72
B
487 496Right-handed alpha
Helix 73
73
B
515 519Right-handed 310
Helix 74
74
B
551 559Right-handed alpha
Helix 75
75
B
570 574Right-handed 310
Helix 76
76
B
593 607Right-handed alpha
Helix 77
77
B
654 662Right-handed alpha
Helix 78
78
B
662 667Right-handed alpha
Helix 79
79
B
681 686Right-handed alpha
Helix 80
80
B
696 701Right-handed 310
Helix 81
81
B
744 749Right-handed 310
Helix 82
82
B
751 756Right-handed 310
Helix 83
83
B
758 762Right-handed 310
Helix 84
84
B
763 774Right-handed alpha
Helix 85
85
B
806 810Right-handed 310
Helix 86
86
B
843 849Right-handed alpha
Helix 87
87
B
1022 1039Right-handed alpha
Helix 88
88
B
1051 1063Right-handed alpha
Helix 89
89
B
1098 1103Right-handed alpha
Helix 90
90
B
1121 1125Right-handed 310
Helix 91
91
B
1131 1141Right-handed alpha
Helix 92
92
B
1143 1153Right-handed alpha
Helix 93
93
B
1197 1210Right-handed alpha
Helix 94
94
C
26 40Right-handed alpha
Helix 95
95
C
59 69Right-handed alpha
Helix 96
96
C
76 80Right-handed 310
Helix 97
97
C
167 171Right-handed 310
Helix 98
98
C
196 201Right-handed alpha
Helix 99
99
C
204 208Right-handed 310
Helix 100
100
C
239 264Right-handed alpha
Helix 101
101
E
9 27Right-handed alpha
Helix 102
102
E
31 36Right-handed alpha
Helix 103
103
E
38 45Right-handed alpha
Helix 104
104
E
65 70Right-handed alpha
Helix 105
105
E
92 104Right-handed alpha
Helix 106
106
E
120 124Right-handed 310
Helix 107
107
E
143 147Right-handed 310
Helix 108
108
E
157 168Right-handed alpha
Helix 109
109
E
171 175Right-handed 310
Helix 110
110
E
182 187Right-handed alpha
Helix 111
111
F
86 103Right-handed alpha
Helix 112
112
F
116 127Right-handed alpha
Helix 113
113
H
83 87Right-handed 310
Helix 114
114
I
59 64Right-handed 310
Helix 115
115
J
16 27Right-handed alpha
Helix 116
116
J
31 39Right-handed alpha
Helix 117
117
J
56 62Right-handed alpha
Helix 118
118
K
5 10Right-handed 310
Helix 119
119
K
39 52Right-handed alpha
Helix 120
120
K
82 111Right-handed alpha
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There are 45 sheets in PDB entry 2NVX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1418 1419first strand
Strand 2
A
16 19anti-parallel
Strand 3
B
1214 1217anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
83 90first strand
Strand 2
A
236 240anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
175 177first strand
Strand 2
A
180 182anti-parallel
Strand 3
A
201 202anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
344 345first strand
Strand 2
B
1128 1129anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1104 1106first strand
Strand 2
A
348 355anti-parallel
Strand 3
A
486 490anti-parallel
Strand 4
A
441 445anti-parallel
Strand 5
A
455 460anti-parallel
Strand 6
A
363 365parallel
Strand 7
A
468 470anti-parallel
Strand 8
A
348 355parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
376 379first strand
Strand 2
A
431 434anti-parallel
Strand 3
A
402 406anti-parallel
Strand 4
A
412 413anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
512 513first strand
Strand 2
A
518 519anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
540 542first strand
Strand 2
A
571 573anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
588 589first strand
Strand 2
A
606 607anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
766 767first strand
Strand 2
A
799 800anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
856 857first strand
Strand 2
A
863 865anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
879 881first strand
Strand 2
A
954 956anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1282 1285first strand
Strand 2
A
1305 1308anti-parallel
Strand 3
A
1116 1119anti-parallel
Strand 4
A
1328 1329anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1141 1142first strand
Strand 2
A
1272 1274anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1224 1228first strand
Strand 2
A
1237 1242anti-parallel
Strand 3
A
1191 1192anti-parallel
Strand 4
A
1147 1154anti-parallel
Strand 5
I
44 45anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1224 1228first strand
Strand 2
A
1237 1242anti-parallel
Strand 3
A
1195 1197anti-parallel
Strand 4
A
1147 1154anti-parallel
Strand 5
I
44 45anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1288 1292first strand
Strand 2
A
1298 1302anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1442 1444first strand
Strand 2
F
133 137anti-parallel
Strand 3
F
143 147anti-parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
95 97first strand
Strand 2
B
125 130anti-parallel
Strand 3
B
166 171anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
102 103first strand
Strand 2
B
109 110anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
204 205first strand
Strand 2
B
208 209anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
404 407first strand
Strand 2
B
214 218anti-parallel
Strand 3
B
497 499parallel
Strand 4
B
537 538anti-parallel
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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
224 227first strand
Strand 2
B
234 242anti-parallel
Strand 3
B
252 259anti-parallel
Strand 4
B
269 272anti-parallel
Strand 5
B
280 281anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
544 545first strand
Strand 2
B
633 635anti-parallel
Strand 3
B
693 694anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
586 590first strand
Strand 2
B
578 582anti-parallel
Strand 3
B
623 627parallel
Strand 4
B
614 618anti-parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
638 639first strand
Strand 2
B
740 741anti-parallel
Strand 3
B
703 704parallel
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There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
793 796first strand
Strand 2
B
853 861anti-parallel
Strand 3
B
961 972anti-parallel
Strand 4
B
946 957anti-parallel
Strand 5
B
904 906anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
804 805first strand
Strand 2
B
1042 1043parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
980 981first strand
Strand 2
B
1085 1094anti-parallel
Strand 3
B
821 827anti-parallel
Strand 4
B
1010 1012parallel
Strand 5
B
838 842anti-parallel
Strand 6
B
989 994parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
980 981first strand
Strand 2
B
1085 1094anti-parallel
Strand 3
B
1069 1070anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
910 912first strand
Strand 2
B
939 940anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
915 917first strand
Strand 2
B
934 936anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1001 1002first strand
Strand 2
B
1072 1073anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1158 1163first strand
Strand 2
B
1191 1196anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
7 13first strand
Strand 2
C
17 23anti-parallel
Strand 3
C
228 233anti-parallel
Strand 4
C
176 179anti-parallel
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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
118 120first strand
Strand 2
C
97 103anti-parallel
Strand 3
C
153 162anti-parallel
Strand 4
C
43 54anti-parallel
Strand 5
L
66 68anti-parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
111 114first strand
Strand 2
C
143 147anti-parallel
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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
61 62first strand
Strand 2
E
78 82anti-parallel
Strand 3
E
107 112parallel
Strand 4
E
131 136parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
87 88first strand
Strand 2
E
115 116parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
153 155first strand
Strand 2
E
195 201anti-parallel
Strand 3
E
207 214anti-parallel
Strand 4
E
177 178parallel
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There are 9 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
95 98first strand
Strand 2
H
141 145anti-parallel
Strand 3
H
54 58anti-parallel
Strand 4
H
7 16anti-parallel
Strand 5
H
23 30anti-parallel
Strand 6
H
37 43anti-parallel
Strand 7
H
121 127anti-parallel
Strand 8
H
112 118anti-parallel
Strand 9
H
101 106anti-parallel
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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
14 15first strand
Strand 2
I
26 29anti-parallel
Strand 3
I
35 37anti-parallel
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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
83 87first strand
Strand 2
I
99 103anti-parallel
Strand 3
I
109 111anti-parallel
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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
19 23first strand
Strand 2
K
30 36anti-parallel
Strand 3
K
70 77anti-parallel
Strand 4
K
56 62anti-parallel
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There are 2 strands in AS sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
29 30first strand
Strand 2
L
37 38anti-parallel
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