Analysis of interatomic Contacts of Structural Units in PDB entry:
2O0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O0K entry

There is 1 chain in PDB entry 2O0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2O0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
24 28Right-handed 310
Helix 3
3
A
51 58Right-handed alpha
Helix 4
4
A
82 86Right-handed 310
Helix 5
5
A
103 116Right-handed alpha
Helix 6
6
A
116 125Right-handed alpha
Helix 7
7
A
140 153Right-handed alpha
Helix 8
8
A
165 181Right-handed alpha
Helix 9
9
A
192 209Right-handed alpha
Helix 10
10
A
240 246Right-handed alpha
Helix 11
11
A
257 260Right-handed 310
Helix 12
12
A
262 275Right-handed alpha
Helix 13
13
A
294 304Right-handed alpha
Helix 14
14
A
314 323Right-handed 310
Helix 15
15
A
332 342Right-handed alpha
Helix 16
16
A
344 353Right-handed alpha
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There are 3 sheets in PDB entry 2O0K. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
36 40anti-parallel
Strand 3
A
47 49anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
135 136anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 221first strand
Strand 2
A
225 228anti-parallel
Strand 3
A
233 238anti-parallel
Strand 4
A
185 190parallel
Strand 5
A
251 255parallel
Strand 6
A
281 286parallel
Strand 7
A
155 160parallel
Strand 8
A
309 313parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il