Analysis of interatomic Contacts of Structural Units in PDB entry:
2O5P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O5P entry

There are 2 chains in PDB entry 2O5P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 44PHE 815
B
 GLN 44PHE 815
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2O5P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
54 67Right-handed alpha
Helix 2
2
A
73 78Right-handed alpha
Helix 3
3
A
90 99Right-handed alpha
Helix 4
4
A
161 165Right-handed 310
Helix 5
5
A
174 180Right-handed alpha
Helix 6
6
A
184 191Right-handed alpha
Helix 7
7
A
228 233Right-handed alpha
Helix 8
8
A
239 241Right-handed 310
Helix 9
9
A
253 258Right-handed alpha
Helix 10
10
A
649 653Right-handed 310
Helix 11
11
A
722 726Right-handed 310
Helix 12
12
A
747 750Right-handed 310
Helix 13
13
B
54 67Right-handed alpha
Helix 14
14
B
73 78Right-handed alpha
Helix 15
15
B
90 99Right-handed alpha
Helix 16
16
B
173 181Right-handed alpha
Helix 17
17
B
184 191Right-handed alpha
Helix 18
18
B
228 233Right-handed alpha
Helix 19
19
B
239 241Right-handed 310
Helix 20
20
B
253 258Right-handed alpha
Helix 21
21
B
625 627Right-handed 310
Helix 22
22
B
647 653Right-handed alpha
Helix 23
23
B
722 726Right-handed 310
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There are 15 sheets in PDB entry 2O5P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
85 89anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
112 116anti-parallel
Strand 3
A
69 72parallel
Strand 4
A
132 133anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 173first strand
Strand 2
A
243 251anti-parallel
Strand 3
A
263 270anti-parallel
Strand 4
A
217 219parallel
Strand 5
A
222 223anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 201first strand
Strand 2
A
204 209anti-parallel
Strand 3
A
212 213anti-parallel
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There are 16 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
441 466anti-parallel
Strand 3
A
411 430anti-parallel
Strand 4
A
392 405anti-parallel
Strand 5
A
344 358anti-parallel
Strand 6
A
326 341anti-parallel
Strand 7
A
307 318anti-parallel
Strand 8
A
290 300anti-parallel
Strand 9
A
278 286anti-parallel
Strand 10
A
806 814anti-parallel
Strand 11
A
775 782anti-parallel
Strand 12
A
760 770anti-parallel
Strand 13
A
728 737anti-parallel
Strand 14
A
711 720anti-parallel
Strand 15
A
685 698anti-parallel
Strand 16
A
703 704anti-parallel
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There are 12 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
441 466anti-parallel
Strand 3
A
471 490anti-parallel
Strand 4
A
520 538anti-parallel
Strand 5
A
543 557anti-parallel
Strand 6
A
563 578anti-parallel
Strand 7
A
583 594anti-parallel
Strand 8
A
611 624anti-parallel
Strand 9
A
629 645anti-parallel
Strand 10
A
664 682anti-parallel
Strand 11
A
685 698anti-parallel
Strand 12
A
703 704anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
798 801anti-parallel
Strand 3
A
790 793anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 746first strand
Strand 2
A
751 757anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 50first strand
Strand 2
B
85 89anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 71first strand
Strand 2
B
112 116parallel
Strand 3
B
105 107anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 172first strand
Strand 2
B
243 251anti-parallel
Strand 3
B
263 270anti-parallel
Strand 4
B
217 219parallel
Strand 5
B
222 224anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 201first strand
Strand 2
B
204 209anti-parallel
Strand 3
B
212 213anti-parallel
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There are 24 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 500first strand
Strand 2
B
441 466anti-parallel
Strand 3
B
471 490anti-parallel
Strand 4
B
520 538anti-parallel
Strand 5
B
543 557anti-parallel
Strand 6
B
563 578anti-parallel
Strand 7
B
583 594anti-parallel
Strand 8
B
611 624anti-parallel
Strand 9
B
629 645anti-parallel
Strand 10
B
664 682anti-parallel
Strand 11
B
685 698anti-parallel
Strand 12
B
711 720anti-parallel
Strand 13
B
728 737anti-parallel
Strand 14
B
760 769anti-parallel
Strand 15
B
775 782anti-parallel
Strand 16
B
806 814anti-parallel
Strand 17
B
278 286anti-parallel
Strand 18
B
290 300anti-parallel
Strand 19
B
307 319anti-parallel
Strand 20
B
326 341anti-parallel
Strand 21
B
344 358anti-parallel
Strand 22
B
392 405anti-parallel
Strand 23
B
411 430anti-parallel
Strand 24
B
441 466anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
366 367first strand
Strand 2
B
798 801anti-parallel
Strand 3
B
790 793anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
740 746first strand
Strand 2
B
751 757anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il