Analysis of interatomic Contacts of Structural Units in PDB entry:
2OLK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OLK entry

There are 4 chains in PDB entry 2OLK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -1PHE 240
B
 LEU -1PHE 240
C
 LEU -1PHE 240
D
 LEU -1PHE 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 2OLK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 48Right-handed alpha
Helix 2
2
A
68 78Right-handed alpha
Helix 3
3
A
93 106Right-handed alpha
Helix 4
4
A
109 124Right-handed alpha
Helix 5
5
A
126 130Right-handed 310
Helix 6
6
A
133 137Right-handed 310
Helix 7
7
A
138 152Right-handed alpha
Helix 8
8
A
168 185Right-handed alpha
Helix 9
9
A
195 203Right-handed alpha
Helix 10
10
A
219 226Right-handed alpha
Helix 11
11
A
229 237Right-handed alpha
Helix 12
12
B
39 48Right-handed alpha
Helix 13
13
B
71 78Right-handed alpha
Helix 14
14
B
93 105Right-handed alpha
Helix 15
15
B
109 124Right-handed alpha
Helix 16
16
B
126 130Right-handed 310
Helix 17
17
B
133 137Right-handed 310
Helix 18
18
B
138 152Right-handed alpha
Helix 19
19
B
168 185Right-handed alpha
Helix 20
20
B
195 203Right-handed alpha
Helix 21
21
B
219 226Right-handed alpha
Helix 22
22
B
229 239Right-handed alpha
Helix 23
23
C
39 48Right-handed alpha
Helix 24
24
C
68 78Right-handed alpha
Helix 25
25
C
93 105Right-handed alpha
Helix 26
26
C
109 124Right-handed alpha
Helix 27
27
C
126 130Right-handed 310
Helix 28
28
C
133 137Right-handed 310
Helix 29
29
C
138 152Right-handed alpha
Helix 30
30
C
168 185Right-handed alpha
Helix 31
31
C
195 203Right-handed alpha
Helix 32
32
C
219 226Right-handed alpha
Helix 33
33
C
229 240Right-handed alpha
Helix 34
34
D
39 48Right-handed alpha
Helix 35
35
D
71 78Right-handed alpha
Helix 36
36
D
93 105Right-handed alpha
Helix 37
37
D
109 124Right-handed alpha
Helix 38
38
D
126 130Right-handed 310
Helix 39
39
D
133 137Right-handed 310
Helix 40
40
D
138 152Right-handed alpha
Helix 41
41
D
168 185Right-handed alpha
Helix 42
42
D
195 203Right-handed alpha
Helix 43
43
D
219 226Right-handed alpha
Helix 44
44
D
229 239Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 2OLK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 24first strand
Strand 2
A
2 11anti-parallel
Strand 3
A
55 60anti-parallel
Strand 4
A
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
157 161parallel
Strand 3
A
188 192parallel
Strand 4
A
29 33parallel
Strand 5
A
205 210parallel
Strand 6
A
213 218anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 24first strand
Strand 2
B
2 11anti-parallel
Strand 3
B
55 60anti-parallel
Strand 4
B
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 82first strand
Strand 2
B
157 161parallel
Strand 3
B
188 192parallel
Strand 4
B
29 33parallel
Strand 5
B
205 210parallel
Strand 6
B
213 218anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 24first strand
Strand 2
C
2 11anti-parallel
Strand 3
C
55 60anti-parallel
Strand 4
C
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 82first strand
Strand 2
C
157 161parallel
Strand 3
C
188 192parallel
Strand 4
C
29 33parallel
Strand 5
C
205 210parallel
Strand 6
C
213 218anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 24first strand
Strand 2
D
2 10anti-parallel
Strand 3
D
55 60anti-parallel
Strand 4
D
63 64anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 82first strand
Strand 2
D
157 161parallel
Strand 3
D
188 192parallel
Strand 4
D
29 33parallel
Strand 5
D
205 210parallel
Strand 6
D
213 218anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il