Analysis of interatomic Contacts of Structural Units in PDB entry:
2ONK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ONK entry

There are 10 chains in PDB entry 2ONK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ASP 240
B
MET 1ASP 240
F
MET 1ASP 240
G
MET 1ASP 240
C
MET 1GLY 252
D
MET 1GLY 252
H
MET 1GLY 252
I
MET 1GLY 252
E
ASN 32SER 342
J
GLY 29MET 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are122 helices in PDB entry 2ONK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
36 46Right-handed alpha
Helix 2
2
A
86 93Right-handed alpha
Helix 3
3
A
99 113Right-handed alpha
Helix 4
4
A
123 127Right-handed 310
Helix 5
5
A
128 142Right-handed alpha
Helix 6
6
A
158 177Right-handed alpha
Helix 7
7
A
186 194Right-handed alpha
Helix 8
8
A
210 217Right-handed alpha
Helix 9
9
A
221 226Right-handed alpha
Helix 10
10
A
228 239Right-handed alpha
Helix 11
11
B
36 46Right-handed alpha
Helix 12
12
B
86 93Right-handed alpha
Helix 13
13
B
99 113Right-handed alpha
Helix 14
14
B
123 127Right-handed 310
Helix 15
15
B
128 142Right-handed alpha
Helix 16
16
B
158 177Right-handed alpha
Helix 17
17
B
186 194Right-handed alpha
Helix 18
18
B
210 217Right-handed alpha
Helix 19
19
B
221 226Right-handed alpha
Helix 20
20
B
228 239Right-handed alpha
Helix 21
21
F
36 46Right-handed alpha
Helix 22
22
F
86 93Right-handed alpha
Helix 23
23
F
99 113Right-handed alpha
Helix 24
24
F
123 127Right-handed 310
Helix 25
25
F
128 142Right-handed alpha
Helix 26
26
F
158 177Right-handed alpha
Helix 27
27
F
186 194Right-handed alpha
Helix 28
28
F
210 217Right-handed alpha
Helix 29
29
F
221 226Right-handed alpha
Helix 30
30
F
228 239Right-handed alpha
Helix 31
31
G
36 46Right-handed alpha
Helix 32
32
G
86 93Right-handed alpha
Helix 33
33
G
99 113Right-handed alpha
Helix 34
34
G
123 127Right-handed 310
Helix 35
35
G
128 142Right-handed alpha
Helix 36
36
G
158 177Right-handed alpha
Helix 37
37
G
186 194Right-handed alpha
Helix 38
38
G
210 217Right-handed alpha
Helix 39
39
G
221 226Right-handed alpha
Helix 40
40
G
228 239Right-handed alpha
Helix 41
41
C
1 30Right-handed alpha
Helix 42
42
C
34 44Right-handed alpha
Helix 43
43
C
44 78Right-handed alpha
Helix 44
44
C
83 97Right-handed alpha
Helix 45
45
C
98 111Right-handed alpha
Helix 46
46
C
127 154Right-handed alpha
Helix 47
47
C
155 165Right-handed alpha
Helix 48
48
C
168 176Right-handed alpha
Helix 49
49
C
176 199Right-handed alpha
Helix 50
50
C
200 205Right-handed alpha
Helix 51
51
C
212 225Right-handed alpha
Helix 52
52
C
226 228Right-handed 310
Helix 53
53
C
229 250Right-handed alpha
Helix 54
54
D
1 31Right-handed alpha
Helix 55
55
D
34 44Right-handed alpha
Helix 56
56
D
44 78Right-handed alpha
Helix 57
57
D
83 97Right-handed alpha
Helix 58
58
D
98 111Right-handed alpha
Helix 59
59
D
114 120Right-handed alpha
Helix 60
60
D
127 154Right-handed alpha
Helix 61
61
D
155 165Right-handed alpha
Helix 62
62
D
168 176Right-handed alpha
Helix 63
63
D
176 199Right-handed alpha
Helix 64
64
D
200 205Right-handed alpha
Helix 65
65
D
212 225Right-handed alpha
Helix 66
66
D
226 228Right-handed 310
Helix 67
67
D
229 250Right-handed alpha
Helix 68
68
H
1 31Right-handed alpha
Helix 69
69
H
34 44Right-handed alpha
Helix 70
70
H
44 78Right-handed alpha
Helix 71
71
H
83 97Right-handed alpha
Helix 72
72
H
98 111Right-handed alpha
Helix 73
73
H
127 154Right-handed alpha
Helix 74
74
H
155 165Right-handed alpha
Helix 75
75
H
168 176Right-handed alpha
Helix 76
76
H
176 199Right-handed alpha
Helix 77
77
H
200 205Right-handed alpha
Helix 78
78
H
212 225Right-handed alpha
Helix 79
79
H
226 228Right-handed 310
Helix 80
80
H
229 250Right-handed alpha
Helix 81
81
I
1 31Right-handed alpha
Helix 82
82
I
34 44Right-handed alpha
Helix 83
83
I
44 78Right-handed alpha
Helix 84
84
I
83 97Right-handed alpha
Helix 85
85
I
98 111Right-handed alpha
Helix 86
86
I
114 120Right-handed alpha
Helix 87
87
I
127 154Right-handed alpha
Helix 88
88
I
155 165Right-handed alpha
Helix 89
89
I
168 176Right-handed alpha
Helix 90
90
I
176 199Right-handed alpha
Helix 91
91
I
200 205Right-handed alpha
Helix 92
92
I
212 225Right-handed alpha
Helix 93
93
I
226 228Right-handed 310
Helix 94
94
I
229 250Right-handed alpha
Helix 95
95
E
43 58Right-handed alpha
Helix 96
96
E
69 79Right-handed alpha
Helix 97
97
E
91 100Right-handed alpha
Helix 98
98
E
133 138Right-handed alpha
Helix 99
99
E
153 170Right-handed alpha
Helix 100
100
E
174 180Right-handed alpha
Helix 101
101
E
181 184Right-handed 310
Helix 102
102
E
219 227Right-handed alpha
Helix 103
103
E
237 243Right-handed alpha
Helix 104
104
E
258 260Right-handed 310
Helix 105
105
E
261 266Right-handed alpha
Helix 106
106
E
295 308Right-handed alpha
Helix 107
107
E
308 318Right-handed alpha
Helix 108
108
E
332 336Right-handed 310
Helix 109
109
J
43 56Right-handed alpha
Helix 110
110
J
69 79Right-handed alpha
Helix 111
111
J
91 100Right-handed alpha
Helix 112
112
J
133 138Right-handed alpha
Helix 113
113
J
153 170Right-handed alpha
Helix 114
114
J
174 180Right-handed alpha
Helix 115
115
J
181 184Right-handed 310
Helix 116
116
J
219 227Right-handed alpha
Helix 117
117
J
237 243Right-handed alpha
Helix 118
118
J
258 260Right-handed 310
Helix 119
119
J
261 266Right-handed alpha
Helix 120
120
J
295 308Right-handed alpha
Helix 121
121
J
308 318Right-handed alpha
Helix 122
122
J
334 338Right-handed 310
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There are 14 sheets in PDB entry 2ONK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
14 22first strand
Strand 2
A
3 11anti-parallel
Strand 3
A
52 57anti-parallel
Strand 4
A
60 61anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
149 151first strand
Strand 2
A
180 184parallel
Strand 3
A
26 30parallel
Strand 4
A
196 201parallel
Strand 5
A
204 209anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
14 22first strand
Strand 2
B
3 11anti-parallel
Strand 3
B
52 57anti-parallel
Strand 4
B
60 61anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
149 151first strand
Strand 2
B
180 184parallel
Strand 3
B
26 30parallel
Strand 4
B
196 201parallel
Strand 5
B
204 209anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
14 22first strand
Strand 2
F
3 11anti-parallel
Strand 3
F
52 57anti-parallel
Strand 4
F
60 61anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
149 151first strand
Strand 2
F
180 184parallel
Strand 3
F
26 30parallel
Strand 4
F
196 201parallel
Strand 5
F
204 209anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
14 22first strand
Strand 2
G
3 11anti-parallel
Strand 3
G
52 57anti-parallel
Strand 4
G
60 61anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
149 151first strand
Strand 2
G
180 184parallel
Strand 3
G
26 30parallel
Strand 4
G
196 201parallel
Strand 5
G
204 209anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
62 67first strand
Strand 2
E
34 39parallel
Strand 3
E
86 89parallel
Strand 4
E
283 288anti-parallel
Strand 5
E
108 113anti-parallel
Strand 6
E
322 328anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
212 215first strand
Strand 2
E
145 148parallel
Strand 3
E
232 236parallel
Strand 4
E
115 119anti-parallel
Strand 5
E
246 248anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
188 191first strand
Strand 2
E
194 198anti-parallel
Strand 3
E
268 272parallel
Strand 4
E
276 279anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
62 67first strand
Strand 2
J
34 39parallel
Strand 3
J
86 89parallel
Strand 4
J
283 288anti-parallel
Strand 5
J
108 113anti-parallel
Strand 6
J
322 328anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
212 215first strand
Strand 2
J
145 148parallel
Strand 3
J
232 236parallel
Strand 4
J
115 119anti-parallel
Strand 5
J
246 248anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
188 191first strand
Strand 2
J
194 198anti-parallel
Strand 3
J
268 272parallel
Strand 4
J
276 279anti-parallel
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