Analysis of interatomic Contacts of Structural Units in PDB entry:
2OOR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OOR entry

There are 3 chains in PDB entry 2OOR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 378
B
 MET 1GLY 381
C
 SER 30MET 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 2OOR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 30Right-handed alpha
Helix 2
2
A
46 54Right-handed alpha
Helix 3
3
A
60 66Right-handed alpha
Helix 4
4
A
106 115Right-handed alpha
Helix 5
5
A
123 125Right-handed 310
Helix 6
6
A
128 134Right-handed 310
Helix 7
7
A
135 156Right-handed alpha
Helix 8
8
A
181 194Right-handed alpha
Helix 9
9
A
206 214Right-handed alpha
Helix 10
10
A
222 227Right-handed alpha
Helix 11
11
A
240 256Right-handed alpha
Helix 12
12
A
277 283Right-handed alpha
Helix 13
13
A
294 298Right-handed 310
Helix 14
14
A
322 326Right-handed 310
Helix 15
15
A
327 344Right-handed alpha
Helix 16
16
A
345 347Right-handed 310
Helix 17
17
A
360 366Right-handed alpha
Helix 18
18
B
19 29Right-handed alpha
Helix 19
19
B
46 54Right-handed alpha
Helix 20
20
B
60 67Right-handed alpha
Helix 21
21
B
79 83Right-handed 310
Helix 22
22
B
86 90Right-handed 310
Helix 23
23
B
105 115Right-handed alpha
Helix 24
24
B
123 125Right-handed 310
Helix 25
25
B
128 134Right-handed 310
Helix 26
26
B
135 156Right-handed alpha
Helix 27
27
B
181 194Right-handed alpha
Helix 28
28
B
206 213Right-handed alpha
Helix 29
29
B
242 248Right-handed alpha
Helix 30
30
B
249 257Right-handed alpha
Helix 31
31
B
277 283Right-handed alpha
Helix 32
32
B
294 298Right-handed 310
Helix 33
33
B
322 326Right-handed 310
Helix 34
34
B
327 344Right-handed alpha
Helix 35
35
B
349 352Right-handed 310
Helix 36
36
B
360 366Right-handed alpha
Helix 37
37
C
35 45Right-handed alpha
Helix 38
38
C
54 61Right-handed alpha
Helix 39
39
C
62 77Right-handed alpha
Helix 40
40
C
93 102Right-handed alpha
Helix 41
41
C
105 107Right-handed 310
Helix 42
42
C
112 116Right-handed alpha
Helix 43
43
C
117 121Right-handed 310
Helix 44
44
C
131 139Right-handed 310
Helix 45
45
C
153 157Right-handed 310
Helix 46
46
C
176 181Right-handed 310
Helix 47
47
C
190 202Right-handed alpha
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There are 7 sheets in PDB entry 2OOR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
32 36parallel
Strand 3
A
2 5parallel
Strand 4
A
70 75parallel
Strand 5
A
95 99parallel
Strand 6
A
118 121parallel
Strand 7
A
367 369anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
197 201parallel
Strand 3
A
174 178parallel
Strand 4
A
260 263parallel
Strand 5
A
289 292parallel
Strand 6
A
315 319parallel
Strand 7
A
308 312anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
32 36parallel
Strand 3
B
2 5parallel
Strand 4
B
70 75parallel
Strand 5
B
95 99parallel
Strand 6
B
118 121parallel
Strand 7
B
367 370anti-parallel
Strand 8
B
373 374anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 165first strand
Strand 2
B
168 170anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 218first strand
Strand 2
B
197 201parallel
Strand 3
B
174 178parallel
Strand 4
B
260 263parallel
Strand 5
B
289 292parallel
Strand 6
B
315 319parallel
Strand 7
B
308 312anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 348first strand
Strand 2
B
353 354anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 34first strand
Strand 2
C
184 188parallel
Strand 3
C
159 164parallel
Strand 4
C
124 128parallel
Strand 5
C
48 53parallel
Strand 6
C
79 84parallel
Strand 7
C
109 111parallel
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