Analysis of interatomic Contacts of Structural Units in PDB entry:
2OQH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OQH entry

There are 4 chains in PDB entry 2OQH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2ASN 369
B
LEU 3THR 376
C
SER 2ASN 369
D
SER 2THR 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 2OQH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
53 64Right-handed alpha
Helix 2
2
A
65 67Right-handed 310
Helix 3
3
A
74 82Right-handed alpha
Helix 4
4
A
84 113Right-handed alpha
Helix 5
5
A
115 120Right-handed alpha
Helix 6
6
A
135 139Right-handed 310
Helix 7
7
A
146 163Right-handed alpha
Helix 8
8
A
174 189Right-handed alpha
Helix 9
9
A
203 215Right-handed alpha
Helix 10
10
A
216 218Right-handed 310
Helix 11
11
A
227 239Right-handed alpha
Helix 12
12
A
251 261Right-handed alpha
Helix 13
13
A
270 275Right-handed alpha
Helix 14
14
A
276 290Right-handed alpha
Helix 15
15
A
302 316Right-handed alpha
Helix 16
16
A
326 330Right-handed 310
Helix 17
17
A
358 369Right-handed alpha
Helix 18
18
B
53 68Right-handed alpha
Helix 19
19
B
74 82Right-handed alpha
Helix 20
20
B
84 113Right-handed alpha
Helix 21
21
B
117 121Right-handed 310
Helix 22
22
B
135 139Right-handed 310
Helix 23
23
B
146 163Right-handed alpha
Helix 24
24
B
174 189Right-handed alpha
Helix 25
25
B
203 215Right-handed alpha
Helix 26
26
B
216 218Right-handed 310
Helix 27
27
B
227 239Right-handed alpha
Helix 28
28
B
251 261Right-handed alpha
Helix 29
29
B
270 275Right-handed alpha
Helix 30
30
B
276 290Right-handed alpha
Helix 31
31
B
302 316Right-handed alpha
Helix 32
32
B
326 330Right-handed 310
Helix 33
33
B
358 373Right-handed alpha
Helix 34
34
C
53 68Right-handed alpha
Helix 35
35
C
74 82Right-handed alpha
Helix 36
36
C
84 113Right-handed alpha
Helix 37
37
C
115 121Right-handed 310
Helix 38
38
C
135 139Right-handed 310
Helix 39
39
C
143 145Right-handed 310
Helix 40
40
C
146 163Right-handed alpha
Helix 41
41
C
174 189Right-handed alpha
Helix 42
42
C
203 215Right-handed alpha
Helix 43
43
C
216 218Right-handed 310
Helix 44
44
C
227 239Right-handed alpha
Helix 45
45
C
251 261Right-handed alpha
Helix 46
46
C
276 290Right-handed alpha
Helix 47
47
C
302 316Right-handed alpha
Helix 48
48
C
326 330Right-handed 310
Helix 49
49
C
358 369Right-handed alpha
Helix 50
50
D
53 68Right-handed alpha
Helix 51
51
D
74 82Right-handed alpha
Helix 52
52
D
84 113Right-handed alpha
Helix 53
53
D
117 121Right-handed 310
Helix 54
54
D
135 139Right-handed 310
Helix 55
55
D
143 145Right-handed 310
Helix 56
56
D
146 163Right-handed alpha
Helix 57
57
D
174 189Right-handed alpha
Helix 58
58
D
203 215Right-handed alpha
Helix 59
59
D
216 218Right-handed 310
Helix 60
60
D
227 239Right-handed alpha
Helix 61
61
D
251 261Right-handed alpha
Helix 62
62
D
270 275Right-handed alpha
Helix 63
63
D
276 290Right-handed alpha
Helix 64
64
D
302 315Right-handed alpha
Helix 65
65
D
326 330Right-handed 310
Helix 66
66
D
358 373Right-handed alpha
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There are 12 sheets in PDB entry 2OQH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
5 15first strand
Strand 2
A
31 40anti-parallel
Strand 3
A
45 51anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
293 296first strand
Strand 2
A
266 269parallel
Strand 3
A
243 245parallel
Strand 4
A
221 223parallel
Strand 5
A
193 197parallel
Strand 6
A
166 170parallel
Strand 7
A
127 134parallel
Strand 8
A
323 324parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
293 296first strand
Strand 2
A
266 269parallel
Strand 3
A
243 245parallel
Strand 4
A
221 223parallel
Strand 5
A
193 197parallel
Strand 6
A
166 170parallel
Strand 7
A
127 134parallel
Strand 8
A
344 346anti-parallel
Strand 9
A
340 341anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
5 17first strand
Strand 2
B
29 40anti-parallel
Strand 3
B
45 50anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
293 296first strand
Strand 2
B
266 269parallel
Strand 3
B
243 245parallel
Strand 4
B
221 223parallel
Strand 5
B
193 197parallel
Strand 6
B
166 170parallel
Strand 7
B
127 134parallel
Strand 8
B
323 324parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
293 296first strand
Strand 2
B
266 269parallel
Strand 3
B
243 245parallel
Strand 4
B
221 223parallel
Strand 5
B
193 197parallel
Strand 6
B
166 170parallel
Strand 7
B
127 134parallel
Strand 8
B
344 346anti-parallel
Strand 9
B
340 341anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
5 16first strand
Strand 2
C
30 40anti-parallel
Strand 3
C
45 51anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
293 296first strand
Strand 2
C
266 269parallel
Strand 3
C
243 245parallel
Strand 4
C
221 223parallel
Strand 5
C
193 197parallel
Strand 6
C
166 170parallel
Strand 7
C
127 134parallel
Strand 8
C
323 324parallel
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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
293 296first strand
Strand 2
C
266 269parallel
Strand 3
C
243 245parallel
Strand 4
C
221 223parallel
Strand 5
C
193 197parallel
Strand 6
C
166 170parallel
Strand 7
C
127 134parallel
Strand 8
C
344 346anti-parallel
Strand 9
C
340 341anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
5 15first strand
Strand 2
D
31 40anti-parallel
Strand 3
D
45 51anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
293 296first strand
Strand 2
D
266 269parallel
Strand 3
D
243 245parallel
Strand 4
D
221 223parallel
Strand 5
D
193 197parallel
Strand 6
D
166 170parallel
Strand 7
D
127 134parallel
Strand 8
D
323 324parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
293 296first strand
Strand 2
D
266 269parallel
Strand 3
D
243 245parallel
Strand 4
D
221 223parallel
Strand 5
D
193 197parallel
Strand 6
D
166 170parallel
Strand 7
D
127 134parallel
Strand 8
D
344 346anti-parallel
Strand 9
D
340 341anti-parallel
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