Analysis of interatomic Contacts of Structural Units in PDB entry:
2OUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OUX entry

There are 2 chains in PDB entry 2OUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 6SER 262
B
GLU 6ALA 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 2OUX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
6 20Right-handed alpha
Helix 2
2
A
22 31Right-handed alpha
Helix 3
3
A
34 43Right-handed alpha
Helix 4
4
A
46 57Right-handed alpha
Helix 5
5
A
58 67Right-handed alpha
Helix 6
6
A
77 83Right-handed alpha
Helix 7
7
A
84 93Right-handed alpha
Helix 8
8
A
96 107Right-handed alpha
Helix 9
9
A
108 118Right-handed alpha
Helix 10
10
A
120 131Right-handed alpha
Helix 11
11
A
137 142Right-handed alpha
Helix 12
12
A
154 166Right-handed alpha
Helix 13
13
A
190 194Right-handed alpha
Helix 14
14
A
201 206Right-handed alpha
Helix 15
15
A
218 230Right-handed alpha
Helix 16
16
A
249 262Right-handed alpha
Helix 17
17
B
6 20Right-handed alpha
Helix 18
18
B
22 31Right-handed alpha
Helix 19
19
B
34 44Right-handed alpha
Helix 20
20
B
46 57Right-handed alpha
Helix 21
21
B
58 67Right-handed alpha
Helix 22
22
B
75 82Right-handed alpha
Helix 23
23
B
84 93Right-handed alpha
Helix 24
24
B
96 105Right-handed alpha
Helix 25
25
B
108 118Right-handed alpha
Helix 26
26
B
120 132Right-handed alpha
Helix 27
27
B
137 142Right-handed alpha
Helix 28
28
B
154 166Right-handed alpha
Helix 29
29
B
190 195Right-handed alpha
Helix 30
30
B
201 206Right-handed alpha
Helix 31
31
B
218 230Right-handed alpha
Helix 32
32
B
249 260Right-handed alpha
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There are 4 sheets in PDB entry 2OUX. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
148 149first strand
Strand 2
A
174 178parallel
Strand 3
A
184 189anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
213 214first strand
Strand 2
A
233 237parallel
Strand 3
A
243 248anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
148 149first strand
Strand 2
B
174 178parallel
Strand 3
B
184 189anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
213 214first strand
Strand 2
B
233 237parallel
Strand 3
B
243 248anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il