Analysis of interatomic Contacts of Structural Units in PDB entry:
2OZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OZL entry

There are 4 chains in PDB entry 2OZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 0SER 361
B
SER 0ILE 329
C
SER 0SER 361
D
SER 0ILE 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 2OZL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
29 55Right-handed alpha
Helix 2
2
A
68 78Right-handed alpha
Helix 3
3
A
91 98Right-handed alpha
Helix 4
4
A
101 110Right-handed alpha
Helix 5
5
A
140 156Right-handed alpha
Helix 6
6
A
168 171Right-handed 310
Helix 7
7
A
172 185Right-handed alpha
Helix 8
8
A
204 208Right-handed alpha
Helix 9
9
A
212 216Right-handed 310
Helix 10
10
A
229 246Right-handed alpha
Helix 11
11
A
274 286Right-handed alpha
Helix 12
12
A
286 298Right-handed alpha
Helix 13
13
A
302 327Right-handed alpha
Helix 14
14
A
331 335Right-handed 310
Helix 15
15
B
5 20Right-handed alpha
Helix 16
16
B
42 48Right-handed alpha
Helix 17
17
B
58 72Right-handed alpha
Helix 18
18
B
82 88Right-handed 310
Helix 19
19
B
89 95Right-handed alpha
Helix 20
20
B
99 104Right-handed alpha
Helix 21
21
B
125 129Right-handed 310
Helix 22
22
B
132 138Right-handed alpha
Helix 23
23
B
149 163Right-handed alpha
Helix 24
24
B
183 188Right-handed alpha
Helix 25
25
B
214 228Right-handed alpha
Helix 26
26
B
245 257Right-handed alpha
Helix 27
27
B
270 282Right-handed alpha
Helix 28
28
B
284 288Right-handed 310
Helix 29
29
B
305 311Right-handed alpha
Helix 30
30
B
315 328Right-handed alpha
Helix 31
31
C
29 55Right-handed alpha
Helix 32
32
C
68 78Right-handed alpha
Helix 33
33
C
91 98Right-handed alpha
Helix 34
34
C
101 110Right-handed alpha
Helix 35
35
C
140 156Right-handed alpha
Helix 36
36
C
168 171Right-handed 310
Helix 37
37
C
172 185Right-handed alpha
Helix 38
38
C
204 208Right-handed alpha
Helix 39
39
C
212 216Right-handed 310
Helix 40
40
C
229 246Right-handed alpha
Helix 41
41
C
274 286Right-handed alpha
Helix 42
42
C
286 298Right-handed alpha
Helix 43
43
C
302 327Right-handed alpha
Helix 44
44
C
331 335Right-handed 310
Helix 45
45
D
5 20Right-handed alpha
Helix 46
46
D
42 48Right-handed alpha
Helix 47
47
D
58 72Right-handed alpha
Helix 48
48
D
82 88Right-handed 310
Helix 49
49
D
89 95Right-handed alpha
Helix 50
50
D
99 104Right-handed alpha
Helix 51
51
D
125 129Right-handed 310
Helix 52
52
D
132 138Right-handed alpha
Helix 53
53
D
149 163Right-handed alpha
Helix 54
54
D
183 188Right-handed alpha
Helix 55
55
D
214 228Right-handed alpha
Helix 56
56
D
245 257Right-handed alpha
Helix 57
57
D
270 282Right-handed alpha
Helix 58
58
D
284 288Right-handed 310
Helix 59
59
D
305 311Right-handed alpha
Helix 60
60
D
315 328Right-handed alpha
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There are 14 sheets in PDB entry 2OZL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4 8first strand
Strand 2
A
24 28anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
13 15first strand
Strand 2
A
222 226anti-parallel
Strand 3
A
251 256parallel
Strand 4
A
189 195parallel
Strand 5
A
161 166parallel
Strand 6
A
84 86parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
198 199first strand
Strand 2
A
202 203anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
346 349first strand
Strand 2
A
356 359anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
2 4first strand
Strand 2
B
179 181anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
52 54first strand
Strand 2
B
23 27parallel
Strand 3
B
75 79parallel
Strand 4
B
113 117parallel
Strand 5
B
167 171parallel
Strand 6
B
143 145parallel
Strand 7
B
240 242anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
199 202first strand
Strand 2
B
233 237anti-parallel
Strand 3
B
207 211parallel
Strand 4
B
259 262parallel
Strand 5
B
293 295parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
4 8first strand
Strand 2
C
24 28anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
13 15first strand
Strand 2
C
222 226anti-parallel
Strand 3
C
251 256parallel
Strand 4
C
189 195parallel
Strand 5
C
161 166parallel
Strand 6
C
84 86parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
198 199first strand
Strand 2
C
202 203anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
346 349first strand
Strand 2
C
356 359anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1 4first strand
Strand 2
D
179 182anti-parallel
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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
52 54first strand
Strand 2
D
23 27parallel
Strand 3
D
75 79parallel
Strand 4
D
113 117parallel
Strand 5
D
167 171parallel
Strand 6
D
143 145parallel
Strand 7
D
240 242anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
199 202first strand
Strand 2
D
233 237anti-parallel
Strand 3
D
207 211parallel
Strand 4
D
259 262parallel
Strand 5
D
293 295parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il