Analysis of interatomic Contacts of Structural Units in PDB entry:
2P0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P0K entry

There is 1 chain in PDB entry 2P0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 27PRO 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2P0K. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
29 37Right-handed alpha
Helix 2
2
A
43 47Right-handed 310
Helix 3
3
A
114 119Right-handed alpha
Helix 4
4
A
132 134Right-handed 310
Helix 5
5
A
135 145Right-handed alpha
Helix 6
6
A
151 155Right-handed 310
Helix 7
7
A
223 229Right-handed alpha
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There are 2 sheets in PDB entry 2P0K. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
101 104first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
71 84anti-parallel
Strand 4
A
63 68anti-parallel
Strand 5
A
110 111anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
210 213first strand
Strand 2
A
196 201anti-parallel
Strand 3
A
184 193anti-parallel
Strand 4
A
172 176anti-parallel
Strand 5
A
219 220anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il