Analysis of interatomic Contacts of Structural Units in PDB entry:
2P7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P7H entry

There are 4 chains in PDB entry 2P7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 21GLN 249
B
 TYR 21GLY 246
C
 TYR 21GLN 249
D
 TYR 21GLY 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 2P7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 27Right-handed alpha
Helix 2
2
A
27 37Right-handed alpha
Helix 3
3
A
38 40Right-handed 310
Helix 4
4
A
53 60Right-handed alpha
Helix 5
5
A
72 83Right-handed alpha
Helix 6
6
A
111 115Right-handed 310
Helix 7
7
A
117 129Right-handed alpha
Helix 8
8
A
145 154Right-handed alpha
Helix 9
9
A
164 171Right-handed alpha
Helix 10
10
A
177 188Right-handed alpha
Helix 11
11
A
204 212Right-handed alpha
Helix 12
12
A
218 232Right-handed alpha
Helix 13
13
B
22 27Right-handed alpha
Helix 14
14
B
27 37Right-handed alpha
Helix 15
15
B
38 40Right-handed 310
Helix 16
16
B
53 60Right-handed alpha
Helix 17
17
B
72 81Right-handed alpha
Helix 18
18
B
93 97Right-handed 310
Helix 19
19
B
111 115Right-handed 310
Helix 20
20
B
117 128Right-handed alpha
Helix 21
21
B
145 154Right-handed alpha
Helix 22
22
B
164 170Right-handed alpha
Helix 23
23
B
177 188Right-handed alpha
Helix 24
24
B
204 213Right-handed alpha
Helix 25
25
B
218 232Right-handed alpha
Helix 26
26
C
22 27Right-handed alpha
Helix 27
27
C
27 37Right-handed alpha
Helix 28
28
C
38 40Right-handed 310
Helix 29
29
C
53 60Right-handed alpha
Helix 30
30
C
72 81Right-handed alpha
Helix 31
31
C
93 97Right-handed 310
Helix 32
32
C
111 115Right-handed 310
Helix 33
33
C
117 129Right-handed alpha
Helix 34
34
C
145 154Right-handed alpha
Helix 35
35
C
164 171Right-handed alpha
Helix 36
36
C
177 188Right-handed alpha
Helix 37
37
C
204 213Right-handed alpha
Helix 38
38
C
218 230Right-handed alpha
Helix 39
39
C
231 234Right-handed 310
Helix 40
40
D
22 27Right-handed alpha
Helix 41
41
D
27 37Right-handed alpha
Helix 42
42
D
38 40Right-handed 310
Helix 43
43
D
53 60Right-handed alpha
Helix 44
44
D
72 83Right-handed alpha
Helix 45
45
D
93 97Right-handed 310
Helix 46
46
D
111 115Right-handed 310
Helix 47
47
D
117 128Right-handed alpha
Helix 48
48
D
145 154Right-handed alpha
Helix 49
49
D
164 170Right-handed alpha
Helix 50
50
D
177 188Right-handed alpha
Helix 51
51
D
204 213Right-handed alpha
Helix 52
52
D
218 230Right-handed alpha
Helix 53
53
D
231 234Right-handed 310
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There are 4 sheets in PDB entry 2P7H. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
66 70parallel
Strand 3
A
45 48parallel
Strand 4
A
103 109parallel
Strand 5
A
130 141parallel
Strand 6
A
236 244anti-parallel
Strand 7
A
191 200anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 91first strand
Strand 2
B
66 70parallel
Strand 3
B
45 48parallel
Strand 4
B
103 109parallel
Strand 5
B
130 141parallel
Strand 6
B
236 244anti-parallel
Strand 7
B
191 200anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 91first strand
Strand 2
C
66 70parallel
Strand 3
C
45 48parallel
Strand 4
C
103 109parallel
Strand 5
C
130 141parallel
Strand 6
C
236 244anti-parallel
Strand 7
C
191 200anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
87 91first strand
Strand 2
D
66 70parallel
Strand 3
D
45 48parallel
Strand 4
D
103 109parallel
Strand 5
D
130 141parallel
Strand 6
D
236 244anti-parallel
Strand 7
D
191 200anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il