Analysis of interatomic Contacts of Structural Units in PDB entry:
2P7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P7I entry

There are 2 chains in PDB entry 2P7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 22GLY 246
B
TYR 21GLN 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 2P7I. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
22 27Right-handed alpha
Helix 2
2
A
27 37Right-handed alpha
Helix 3
3
A
38 40Right-handed 310
Helix 4
4
A
53 60Right-handed alpha
Helix 5
5
A
72 83Right-handed alpha
Helix 6
6
A
93 97Right-handed 310
Helix 7
7
A
111 115Right-handed 310
Helix 8
8
A
117 128Right-handed alpha
Helix 9
9
A
145 154Right-handed alpha
Helix 10
10
A
164 170Right-handed alpha
Helix 11
11
A
177 188Right-handed alpha
Helix 12
12
A
204 214Right-handed alpha
Helix 13
13
A
218 230Right-handed alpha
Helix 14
14
A
231 234Right-handed 310
Helix 15
15
B
22 27Right-handed alpha
Helix 16
16
B
27 37Right-handed alpha
Helix 17
17
B
38 40Right-handed 310
Helix 18
18
B
53 60Right-handed alpha
Helix 19
19
B
72 83Right-handed alpha
Helix 20
20
B
93 97Right-handed 310
Helix 21
21
B
111 115Right-handed 310
Helix 22
22
B
117 128Right-handed alpha
Helix 23
23
B
145 154Right-handed alpha
Helix 24
24
B
164 171Right-handed alpha
Helix 25
25
B
177 188Right-handed alpha
Helix 26
26
B
204 212Right-handed alpha
Helix 27
27
B
218 230Right-handed alpha
Helix 28
28
B
231 234Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 2P7I. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 91first strand
Strand 2
A
66 70parallel
Strand 3
A
45 48parallel
Strand 4
A
103 109parallel
Strand 5
A
130 141parallel
Strand 6
A
236 244anti-parallel
Strand 7
A
191 200anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
87 91first strand
Strand 2
B
66 70parallel
Strand 3
B
45 48parallel
Strand 4
B
103 109parallel
Strand 5
B
130 141parallel
Strand 6
B
236 244anti-parallel
Strand 7
B
191 200anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il