Analysis of interatomic Contacts of Structural Units in PDB entry:
2PKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PKG entry

There are 4 chains in PDB entry 2PKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 10LEU 588
B
LEU 10LEU 588
C
GLY 91ARG 170
D
GLY 91ARG 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 2PKG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
15 21Right-handed alpha
Helix 2
2
A
28 33Right-handed alpha
Helix 3
3
A
36 42Right-handed alpha
Helix 4
4
A
53 58Right-handed alpha
Helix 5
5
A
62 73Right-handed alpha
Helix 6
6
A
85 88Right-handed 310
Helix 7
7
A
89 97Right-handed alpha
Helix 8
8
A
101 118Right-handed alpha
Helix 9
9
A
120 127Right-handed alpha
Helix 10
10
A
127 138Right-handed alpha
Helix 11
11
A
140 149Right-handed alpha
Helix 12
12
A
154 158Right-handed 310
Helix 13
13
A
161 174Right-handed alpha
Helix 14
14
A
178 188Right-handed alpha
Helix 15
15
A
188 195Right-handed alpha
Helix 16
16
A
198 204Right-handed alpha
Helix 17
17
A
204 214Right-handed alpha
Helix 18
18
A
217 233Right-handed alpha
Helix 19
19
A
236 241Right-handed alpha
Helix 20
20
A
243 254Right-handed alpha
Helix 21
21
A
256 266Right-handed alpha
Helix 22
22
A
266 274Right-handed alpha
Helix 23
23
A
275 282Right-handed alpha
Helix 24
24
A
282 292Right-handed alpha
Helix 25
25
A
295 312Right-handed alpha
Helix 26
26
A
317 325Right-handed alpha
Helix 27
27
A
325 334Right-handed alpha
Helix 28
28
A
338 349Right-handed alpha
Helix 29
29
A
350 352Right-handed 310
Helix 30
30
A
357 365Right-handed alpha
Helix 31
31
A
365 374Right-handed alpha
Helix 32
32
A
377 392Right-handed alpha
Helix 33
33
A
396 402Right-handed alpha
Helix 34
34
A
404 412Right-handed alpha
Helix 35
35
A
416 435Right-handed alpha
Helix 36
36
A
435 443Right-handed alpha
Helix 37
37
A
443 450Right-handed alpha
Helix 38
38
A
451 453Right-handed 310
Helix 39
39
A
455 474Right-handed alpha
Helix 40
40
A
474 482Right-handed alpha
Helix 41
41
A
482 489Right-handed alpha
Helix 42
42
A
494 513Right-handed alpha
Helix 43
43
A
513 521Right-handed alpha
Helix 44
44
A
521 529Right-handed alpha
Helix 45
45
A
533 547Right-handed alpha
Helix 46
46
A
552 560Right-handed alpha
Helix 47
47
A
561 569Right-handed alpha
Helix 48
48
A
572 587Right-handed alpha
Helix 49
49
B
15 21Right-handed alpha
Helix 50
50
B
25 33Right-handed alpha
Helix 51
51
B
36 42Right-handed alpha
Helix 52
52
B
43 51Right-handed alpha
Helix 53
53
B
51 58Right-handed alpha
Helix 54
54
B
62 73Right-handed alpha
Helix 55
55
B
85 88Right-handed 310
Helix 56
56
B
89 97Right-handed alpha
Helix 57
57
B
101 119Right-handed alpha
Helix 58
58
B
120 137Right-handed alpha
Helix 59
59
B
140 149Right-handed alpha
Helix 60
60
B
150 155Right-handed alpha
Helix 61
61
B
159 175Right-handed alpha
Helix 62
62
B
178 195Right-handed alpha
Helix 63
63
B
197 204Right-handed alpha
Helix 64
64
B
204 214Right-handed alpha
Helix 65
65
B
217 235Right-handed alpha
Helix 66
66
B
236 244Right-handed alpha
Helix 67
67
B
244 254Right-handed alpha
Helix 68
68
B
256 266Right-handed alpha
Helix 69
69
B
266 275Right-handed alpha
Helix 70
70
B
275 282Right-handed alpha
Helix 71
71
B
282 292Right-handed alpha
Helix 72
72
B
295 312Right-handed alpha
Helix 73
73
B
317 325Right-handed alpha
Helix 74
74
B
326 334Right-handed alpha
Helix 75
75
B
338 347Right-handed alpha
Helix 76
76
B
348 351Right-handed 310
Helix 77
77
B
352 357Right-handed alpha
Helix 78
78
B
357 365Right-handed alpha
Helix 79
79
B
365 373Right-handed alpha
Helix 80
80
B
377 387Right-handed alpha
Helix 81
81
B
387 395Right-handed alpha
Helix 82
82
B
396 404Right-handed alpha
Helix 83
83
B
404 412Right-handed alpha
Helix 84
84
B
416 435Right-handed alpha
Helix 85
85
B
435 443Right-handed alpha
Helix 86
86
B
443 450Right-handed alpha
Helix 87
87
B
451 453Right-handed 310
Helix 88
88
B
455 474Right-handed alpha
Helix 89
89
B
474 481Right-handed alpha
Helix 90
90
B
481 488Right-handed alpha
Helix 91
91
B
489 492Right-handed 310
Helix 92
92
B
494 513Right-handed alpha
Helix 93
93
B
513 521Right-handed alpha
Helix 94
94
B
521 528Right-handed alpha
Helix 95
95
B
529 531Right-handed 310
Helix 96
96
B
533 548Right-handed alpha
Helix 97
97
B
552 559Right-handed alpha
Helix 98
98
B
561 569Right-handed alpha
Helix 99
99
B
572 582Right-handed alpha
Helix 100
100
B
582 587Right-handed alpha
Helix 101
101
C
99 104Right-handed alpha
Helix 102
102
C
113 129Right-handed alpha
Helix 103
103
C
140 149Right-handed alpha
Helix 104
104
C
153 169Right-handed alpha
Helix 105
105
D
99 104Right-handed alpha
Helix 106
106
D
113 126Right-handed alpha
Helix 107
107
D
140 149Right-handed alpha
Helix 108
108
D
153 169Right-handed alpha
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There are no sheets in PDB entry 2PKG

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