Analysis of interatomic Contacts of Structural Units in PDB entry:
2PL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PL0 entry

There is 1 chain in PDB entry 2PL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 231PHE 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2PL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
232 236Right-handed 310
Helix 2
2
A
241 243Right-handed 310
Helix 3
3
A
281 295Right-handed alpha
Helix 4
4
A
323 330Right-handed alpha
Helix 5
5
A
330 335Right-handed alpha
Helix 6
6
A
337 358Right-handed alpha
Helix 7
7
A
366 368Right-handed 310
Helix 8
8
A
385 389Right-handed 310
Helix 9
9
A
403 407Right-handed 310
Helix 10
10
A
408 415Right-handed alpha
Helix 11
11
A
418 434Right-handed alpha
Helix 12
12
A
445 455Right-handed alpha
Helix 13
13
A
466 477Right-handed alpha
Helix 14
14
A
480 484Right-handed 310
Helix 15
15
A
486 496Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2PL0. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 250first strand
Strand 2
A
259 264anti-parallel
Strand 3
A
268 274anti-parallel
Strand 4
A
313 317anti-parallel
Strand 5
A
303 307anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 372first strand
Strand 2
A
378 380anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il