Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q0Z entry

There is 1 chain in PDB entry 2Q0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 THR 33ALA 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2Q0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
34 44Right-handed alpha
Helix 2
2
X
45 49Right-handed 310
Helix 3
3
X
57 68Right-handed alpha
Helix 4
4
X
79 93Right-handed alpha
Helix 5
5
X
98 126Right-handed alpha
Helix 6
6
X
128 145Right-handed alpha
Helix 7
7
X
151 156Right-handed 310
Helix 8
8
X
160 170Right-handed alpha
Helix 9
9
X
174 181Right-handed alpha
Helix 10
10
X
182 191Right-handed alpha
Helix 11
11
X
193 205Right-handed alpha
Helix 12
12
X
218 222Right-handed 310
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There are 2 sheets in PDB entry 2Q0Z. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
210 216first strand
Strand 2
X
227 236anti-parallel
Strand 3
X
280 288anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
268 275first strand
Strand 2
X
257 263anti-parallel
Strand 3
X
293 303anti-parallel
Strand 4
X
311 319anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il