Analysis of interatomic Contacts of Structural Units in PDB entry:
2QUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QUO entry

There is 1 chain in PDB entry 2QUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 197PHE 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 2QUO. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
211 217Right-handed alpha
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There are 2 sheets in PDB entry 2QUO. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
206 210first strand
Strand 2
A
238 244parallel
Strand 3
A
294 302anti-parallel
Strand 4
A
259 265anti-parallel
Strand 5
A
272 277anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
223 227first strand
Strand 2
A
313 318anti-parallel
Strand 3
A
249 255anti-parallel
Strand 4
A
285 291anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il