Analysis of interatomic Contacts of Structural Units in PDB entry:
2QVN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QVN entry

There is 1 chain in PDB entry 2QVN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4PHE 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2QVN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 19Right-handed 310
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
25 36Right-handed alpha
Helix 4
4
A
46 48Right-handed 310
Helix 5
5
A
50 61Right-handed alpha
Helix 6
6
A
68 77Right-handed alpha
Helix 7
7
A
84 96Right-handed alpha
Helix 8
8
A
97 99Right-handed 310
Helix 9
9
A
101 120Right-handed alpha
Helix 10
10
A
129 135Right-handed alpha
Helix 11
11
A
140 159Right-handed alpha
Helix 12
12
A
179 190Right-handed alpha
Helix 13
13
A
205 208Right-handed 310
Helix 14
14
A
209 219Right-handed alpha
Helix 15
15
A
236 245Right-handed alpha
Helix 16
16
A
255 259Right-handed 310
Helix 17
17
A
260 270Right-handed alpha
Helix 18
18
A
277 284Right-handed alpha
Helix 19
19
A
294 301Right-handed alpha
Helix 20
20
A
311 316Right-handed alpha
Helix 21
21
A
318 331Right-handed alpha
Helix 22
22
A
333 348Right-handed alpha
Helix 23
23
A
351 363Right-handed alpha
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There are 2 sheets in PDB entry 2QVN. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 44first strand
Strand 2
A
121 128parallel
Strand 3
A
164 173parallel
Strand 4
A
194 201parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 227first strand
Strand 2
A
250 253parallel
Strand 3
A
273 276parallel
Strand 4
A
304 307parallel
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