Analysis of interatomic Contacts of Structural Units in PDB entry:
2R17


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R17 entry

There are 4 chains in PDB entry 2R17 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 0PRO 182
B
 MSE 0PRO 182
C
 ASP 483ARG 780
D
 PHE 484ARG 780
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 2R17. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 26Right-handed alpha
Helix 2
2
A
42 53Right-handed alpha
Helix 3
3
A
95 107Right-handed alpha
Helix 4
4
B
19 26Right-handed alpha
Helix 5
5
B
42 53Right-handed alpha
Helix 6
6
B
95 107Right-handed alpha
Helix 7
7
C
487 499Right-handed alpha
Helix 8
8
C
502 519Right-handed alpha
Helix 9
9
C
524 545Right-handed alpha
Helix 10
10
C
552 574Right-handed alpha
Helix 11
11
C
577 595Right-handed alpha
Helix 12
12
C
598 618Right-handed alpha
Helix 13
13
C
620 636Right-handed alpha
Helix 14
14
C
642 659Right-handed alpha
Helix 15
15
C
662 673Right-handed alpha
Helix 16
16
C
673 679Right-handed alpha
Helix 17
17
C
692 710Right-handed alpha
Helix 18
18
C
712 732Right-handed alpha
Helix 19
19
C
739 752Right-handed alpha
Helix 20
20
C
760 777Right-handed alpha
Helix 21
21
D
484 498Right-handed alpha
Helix 22
22
D
502 518Right-handed alpha
Helix 23
23
D
524 529Right-handed alpha
Helix 24
24
D
529 546Right-handed alpha
Helix 25
25
D
547 549Right-handed 310
Helix 26
26
D
552 574Right-handed alpha
Helix 27
27
D
577 595Right-handed alpha
Helix 28
28
D
598 618Right-handed alpha
Helix 29
29
D
620 638Right-handed alpha
Helix 30
30
D
642 660Right-handed alpha
Helix 31
31
D
662 674Right-handed alpha
Helix 32
32
D
675 678Right-handed 310
Helix 33
33
D
695 709Right-handed alpha
Helix 34
34
D
712 732Right-handed alpha
Helix 35
35
D
741 754Right-handed alpha
Helix 36
36
D
760 777Right-handed alpha
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There are 4 sheets in PDB entry 2R17. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
33 36parallel
Strand 3
A
1 6parallel
Strand 4
A
149 155anti-parallel
Strand 5
A
160 166anti-parallel
Strand 6
A
173 179anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 77first strand
Strand 2
A
80 85anti-parallel
Strand 3
A
110 112parallel
Strand 4
A
127 131parallel
Strand 5
A
120 124anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
33 36parallel
Strand 3
B
1 6parallel
Strand 4
B
149 155anti-parallel
Strand 5
B
159 168anti-parallel
Strand 6
B
171 180anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 77first strand
Strand 2
B
80 85anti-parallel
Strand 3
B
110 112parallel
Strand 4
B
127 131parallel
Strand 5
B
120 124anti-parallel
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