Analysis of interatomic Contacts of Structural Units in PDB entry:
2R3E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R3E entry

There is 1 chain in PDB entry 2R3E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MSE 1PRO 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2R3E. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
5 13Right-handed alpha
Helix 2
2
A
21 25Right-handed 310
Helix 3
3
A
37 52Right-handed alpha
Helix 4
4
A
61 63Right-handed 310
Helix 5
5
A
64 72Right-handed alpha
Helix 6
6
A
82 93Right-handed alpha
Helix 7
7
A
105 119Right-handed alpha
Helix 8
8
A
129 138Right-handed alpha
Helix 9
9
A
144 146Right-handed 310
Helix 10
10
A
153 162Right-handed alpha
Helix 11
11
A
164 168Right-handed 310
Helix 12
12
A
169 181Right-handed alpha
Helix 13
13
A
206 210Right-handed 310
Helix 14
14
A
213 229Right-handed alpha
Helix 15
15
A
232 252Right-handed alpha
Helix 16
16
A
258 265Right-handed alpha
Helix 17
17
A
265 274Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2R3E.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
2 3first strand
Strand 2
A
200 201parallel
Strand 3
A
192 194anti-parallel
Strand 4
A
183 186anti-parallel
Strand 5
A
148 151parallel
Strand 6
A
124 128parallel
Strand 7
A
95 98parallel
Strand 8
A
27 31parallel
Strand 9
A
55 59parallel
Strand 10
A
76 78parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il