Analysis of interatomic Contacts of Structural Units in PDB entry:
2R6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R6E entry

There are 2 chains in PDB entry 2R6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 8LEU 441
B
ARG 8LEU 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 2R6E. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
13 27Right-handed alpha
Helix 2
2
A
30 38Right-handed alpha
Helix 3
3
A
39 43Right-handed 310
Helix 4
4
A
45 61Right-handed alpha
Helix 5
5
A
66 77Right-handed alpha
Helix 6
6
A
80 83Right-handed 310
Helix 7
7
A
84 95Right-handed alpha
Helix 8
8
A
98 100Right-handed 310
Helix 9
9
A
101 131Right-handed alpha
Helix 10
10
A
136 150Right-handed alpha
Helix 11
11
A
190 198Right-handed alpha
Helix 12
12
A
215 231Right-handed alpha
Helix 13
13
A
243 257Right-handed alpha
Helix 14
14
A
259 266Right-handed alpha
Helix 15
15
A
269 285Right-handed alpha
Helix 16
16
A
297 310Right-handed alpha
Helix 17
17
A
321 325Right-handed 310
Helix 18
18
A
336 354Right-handed alpha
Helix 19
19
A
377 382Right-handed alpha
Helix 20
20
A
385 390Right-handed alpha
Helix 21
21
B
13 27Right-handed alpha
Helix 22
22
B
30 38Right-handed alpha
Helix 23
23
B
39 43Right-handed 310
Helix 24
24
B
45 61Right-handed alpha
Helix 25
25
B
66 77Right-handed alpha
Helix 26
26
B
84 95Right-handed alpha
Helix 27
27
B
98 100Right-handed 310
Helix 28
28
B
101 131Right-handed alpha
Helix 29
29
B
136 151Right-handed alpha
Helix 30
30
B
190 198Right-handed alpha
Helix 31
31
B
215 231Right-handed alpha
Helix 32
32
B
243 257Right-handed alpha
Helix 33
33
B
259 266Right-handed alpha
Helix 34
34
B
269 285Right-handed alpha
Helix 35
35
B
297 310Right-handed alpha
Helix 36
36
B
321 325Right-handed 310
Helix 37
37
B
336 354Right-handed alpha
Helix 38
38
B
377 382Right-handed alpha
Helix 39
39
B
385 390Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2R6E. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
288 291first strand
Strand 2
A
235 239parallel
Strand 3
A
316 320parallel
Strand 4
A
357 361parallel
Strand 5
A
205 209parallel
Strand 6
A
392 397parallel
Strand 7
A
411 419anti-parallel
Strand 8
A
425 432anti-parallel
Strand 9
A
437 439anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
288 291first strand
Strand 2
B
235 239parallel
Strand 3
B
316 320parallel
Strand 4
B
357 361parallel
Strand 5
B
205 209parallel
Strand 6
B
392 397parallel
Strand 7
B
411 419anti-parallel
Strand 8
B
425 432anti-parallel
Strand 9
B
437 439anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il