Analysis of interatomic Contacts of Structural Units in PDB entry:
2R7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R7F entry

There is 1 chain in PDB entry 2R7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3VAL 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2R7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 19Right-handed alpha
Helix 2
2
A
25 31Right-handed alpha
Helix 3
3
A
36 47Right-handed alpha
Helix 4
4
A
56 61Right-handed alpha
Helix 5
5
A
122 126Right-handed 310
Helix 6
6
A
131 141Right-handed alpha
Helix 7
7
A
155 163Right-handed alpha
Helix 8
8
A
202 211Right-handed alpha
Helix 9
9
A
215 233Right-handed alpha
Helix 10
10
A
260 284Right-handed alpha
Helix 11
11
A
304 315Right-handed alpha
Helix 12
12
A
344 358Right-handed alpha
Helix 13
13
A
365 401Right-handed alpha
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There are 6 sheets in PDB entry 2R7F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
185 195parallel
Strand 3
A
170 179anti-parallel
Strand 4
A
113 120anti-parallel
Strand 5
A
102 110anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 93first strand
Strand 2
A
197 201parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
149 151anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 248first strand
Strand 2
A
251 256anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 293first strand
Strand 2
A
318 321anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 433first strand
Strand 2
A
418 422anti-parallel
Strand 3
A
407 413anti-parallel
Strand 4
A
441 450anti-parallel
Strand 5
A
455 460anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il