Analysis of interatomic Contacts of Structural Units in PDB entry:
2R86


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R86 entry

There are 2 chains in PDB entry 2R86 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 334
B
 MET 1THR 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 2R86. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 23Right-handed alpha
Helix 2
2
A
32 34Right-handed 310
Helix 3
3
A
35 41Right-handed alpha
Helix 4
4
A
55 62Right-handed alpha
Helix 5
5
A
71 77Right-handed alpha
Helix 6
6
A
77 83Right-handed alpha
Helix 7
7
A
93 100Right-handed alpha
Helix 8
8
A
100 111Right-handed alpha
Helix 9
9
A
121 125Right-handed 310
Helix 10
10
A
147 160Right-handed alpha
Helix 11
11
A
163 167Right-handed 310
Helix 12
12
A
209 213Right-handed 310
Helix 13
13
A
214 220Right-handed alpha
Helix 14
14
A
238 240Right-handed 310
Helix 15
15
A
241 260Right-handed alpha
Helix 16
16
A
289 296Right-handed 310
Helix 17
17
A
301 305Right-handed 310
Helix 18
18
A
311 326Right-handed alpha
Helix 19
19
A
328 331Right-handed 310
Helix 20
20
B
12 23Right-handed alpha
Helix 21
21
B
32 34Right-handed 310
Helix 22
22
B
35 41Right-handed alpha
Helix 23
23
B
55 62Right-handed alpha
Helix 24
24
B
71 77Right-handed alpha
Helix 25
25
B
77 83Right-handed alpha
Helix 26
26
B
93 100Right-handed alpha
Helix 27
27
B
100 111Right-handed alpha
Helix 28
28
B
121 125Right-handed 310
Helix 29
29
B
147 158Right-handed alpha
Helix 30
30
B
207 211Right-handed alpha
Helix 31
31
B
214 220Right-handed alpha
Helix 32
32
B
238 240Right-handed 310
Helix 33
33
B
241 260Right-handed alpha
Helix 34
34
B
289 296Right-handed 310
Helix 35
35
B
301 305Right-handed 310
Helix 36
36
B
311 326Right-handed alpha
Helix 37
37
B
328 331Right-handed 310
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There are 8 sheets in PDB entry 2R86. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
27 30parallel
Strand 3
A
4 8parallel
Strand 4
A
64 66parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 89first strand
Strand 2
A
333 334anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
A
170 174anti-parallel
Strand 3
A
129 133anti-parallel
Strand 4
A
143 145anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 234first strand
Strand 2
A
193 206anti-parallel
Strand 3
A
179 188anti-parallel
Strand 4
A
265 273anti-parallel
Strand 5
A
279 285anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
27 30parallel
Strand 3
B
4 8parallel
Strand 4
B
64 66parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
333 334anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 145first strand
Strand 2
B
129 132anti-parallel
Strand 3
B
171 174anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 234first strand
Strand 2
B
193 206anti-parallel
Strand 3
B
179 188anti-parallel
Strand 4
B
265 273anti-parallel
Strand 5
B
279 285anti-parallel
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