Analysis of interatomic Contacts of Structural Units in PDB entry:
2RCV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RCV entry

There are 8 chains in PDB entry 2RCV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 2ARG 201
B
ALA 2ARG 201
C
ALA 2ARG 201
D
ALA 2ARG 201
E
ALA 2ARG 201
F
ALA 2ARG 201
G
ALA 2ARG 201
H
ALA 2ARG 201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 2RCV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
20 30Right-handed alpha
Helix 2
2
A
30 43Right-handed alpha
Helix 3
3
A
46 51Right-handed alpha
Helix 4
4
A
53 60Right-handed alpha
Helix 5
5
A
61 64Right-handed 310
Helix 6
6
A
68 88Right-handed alpha
Helix 7
7
A
98 110Right-handed alpha
Helix 8
8
A
111 126Right-handed alpha
Helix 9
9
A
151 156Right-handed 310
Helix 10
10
A
166 169Right-handed 310
Helix 11
11
A
170 175Right-handed alpha
Helix 12
12
A
177 186Right-handed alpha
Helix 13
13
A
190 201Right-handed alpha
Helix 14
14
B
20 30Right-handed alpha
Helix 15
15
B
30 43Right-handed alpha
Helix 16
16
B
48 52Right-handed 310
Helix 17
17
B
53 60Right-handed alpha
Helix 18
18
B
61 64Right-handed 310
Helix 19
19
B
68 88Right-handed alpha
Helix 20
20
B
98 110Right-handed alpha
Helix 21
21
B
111 126Right-handed alpha
Helix 22
22
B
151 156Right-handed 310
Helix 23
23
B
166 169Right-handed 310
Helix 24
24
B
170 175Right-handed alpha
Helix 25
25
B
177 186Right-handed alpha
Helix 26
26
B
190 201Right-handed alpha
Helix 27
27
C
20 30Right-handed alpha
Helix 28
28
C
30 43Right-handed alpha
Helix 29
29
C
46 51Right-handed alpha
Helix 30
30
C
53 60Right-handed alpha
Helix 31
31
C
68 88Right-handed alpha
Helix 32
32
C
98 110Right-handed alpha
Helix 33
33
C
111 126Right-handed alpha
Helix 34
34
C
151 156Right-handed 310
Helix 35
35
C
166 169Right-handed 310
Helix 36
36
C
170 175Right-handed alpha
Helix 37
37
C
177 186Right-handed alpha
Helix 38
38
C
190 201Right-handed alpha
Helix 39
39
D
20 30Right-handed alpha
Helix 40
40
D
30 44Right-handed alpha
Helix 41
41
D
53 60Right-handed alpha
Helix 42
42
D
61 64Right-handed 310
Helix 43
43
D
68 88Right-handed alpha
Helix 44
44
D
98 110Right-handed alpha
Helix 45
45
D
111 125Right-handed alpha
Helix 46
46
D
151 156Right-handed 310
Helix 47
47
D
166 169Right-handed 310
Helix 48
48
D
170 175Right-handed alpha
Helix 49
49
D
177 186Right-handed alpha
Helix 50
50
D
190 201Right-handed alpha
Helix 51
51
E
20 30Right-handed alpha
Helix 52
52
E
30 44Right-handed alpha
Helix 53
53
E
46 51Right-handed alpha
Helix 54
54
E
53 60Right-handed alpha
Helix 55
55
E
61 64Right-handed 310
Helix 56
56
E
65 88Right-handed alpha
Helix 57
57
E
98 110Right-handed alpha
Helix 58
58
E
111 126Right-handed alpha
Helix 59
59
E
151 156Right-handed 310
Helix 60
60
E
166 169Right-handed 310
Helix 61
61
E
170 175Right-handed alpha
Helix 62
62
E
177 186Right-handed alpha
Helix 63
63
E
190 201Right-handed alpha
Helix 64
64
F
20 30Right-handed alpha
Helix 65
65
F
30 43Right-handed alpha
Helix 66
66
F
46 51Right-handed alpha
Helix 67
67
F
53 60Right-handed alpha
Helix 68
68
F
61 64Right-handed 310
Helix 69
69
F
68 88Right-handed alpha
Helix 70
70
F
98 110Right-handed alpha
Helix 71
71
F
111 126Right-handed alpha
Helix 72
72
F
151 156Right-handed 310
Helix 73
73
F
166 169Right-handed 310
Helix 74
74
F
170 175Right-handed alpha
Helix 75
75
F
177 186Right-handed alpha
Helix 76
76
F
190 201Right-handed alpha
Helix 77
77
G
20 30Right-handed alpha
Helix 78
78
G
30 44Right-handed alpha
Helix 79
79
G
46 51Right-handed alpha
Helix 80
80
G
53 60Right-handed alpha
Helix 81
81
G
61 64Right-handed 310
Helix 82
82
G
65 88Right-handed alpha
Helix 83
83
G
98 110Right-handed alpha
Helix 84
84
G
111 126Right-handed alpha
Helix 85
85
G
151 156Right-handed 310
Helix 86
86
G
166 169Right-handed 310
Helix 87
87
G
170 175Right-handed alpha
Helix 88
88
G
177 186Right-handed alpha
Helix 89
89
G
190 201Right-handed alpha
Helix 90
90
H
20 30Right-handed alpha
Helix 91
91
H
30 43Right-handed alpha
Helix 92
92
H
47 51Right-handed 310
Helix 93
93
H
53 59Right-handed alpha
Helix 94
94
H
60 64Right-handed 310
Helix 95
95
H
65 88Right-handed alpha
Helix 96
96
H
98 110Right-handed alpha
Helix 97
97
H
111 126Right-handed alpha
Helix 98
98
H
151 156Right-handed 310
Helix 99
99
H
166 169Right-handed 310
Helix 100
100
H
170 175Right-handed alpha
Helix 101
101
H
177 186Right-handed alpha
Helix 102
102
H
190 201Right-handed alpha
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There are 8 sheets in PDB entry 2RCV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
140 147first strand
Strand 2
A
130 137anti-parallel
Strand 3
A
158 164anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
140 147first strand
Strand 2
B
130 137anti-parallel
Strand 3
B
158 164anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
140 147first strand
Strand 2
C
130 137anti-parallel
Strand 3
C
158 164anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
140 147first strand
Strand 2
D
130 137anti-parallel
Strand 3
D
158 164anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
140 147first strand
Strand 2
E
130 137anti-parallel
Strand 3
E
158 164anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
140 147first strand
Strand 2
F
130 137anti-parallel
Strand 3
F
158 164anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
140 147first strand
Strand 2
G
130 137anti-parallel
Strand 3
G
158 164anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
140 147first strand
Strand 2
H
130 137anti-parallel
Strand 3
H
158 164anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il