Analysis of interatomic Contacts of Structural Units in PDB entry:
2RGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RGH entry

There is 1 chain in PDB entry 2RGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 0GLU 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2RGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 17Right-handed alpha
Helix 2
2
A
27 40Right-handed alpha
Helix 3
3
A
55 59Right-handed 310
Helix 4
4
A
67 74Right-handed 310
Helix 5
5
A
75 93Right-handed alpha
Helix 6
6
A
116 131Right-handed alpha
Helix 7
7
A
144 152Right-handed alpha
Helix 8
8
A
172 187Right-handed alpha
Helix 9
9
A
232 234Right-handed 310
Helix 10
10
A
235 241Right-handed alpha
Helix 11
11
A
265 267Right-handed 310
Helix 12
12
A
313 328Right-handed alpha
Helix 13
13
A
334 338Right-handed 310
Helix 14
14
A
429 431Right-handed 310
Helix 15
15
A
432 453Right-handed alpha
Helix 16
16
A
475 490Right-handed alpha
Helix 17
17
A
493 505Right-handed alpha
Helix 18
18
A
507 517Right-handed alpha
Helix 19
19
A
525 539Right-handed alpha
Helix 20
20
A
543 550Right-handed alpha
Helix 21
21
A
553 558Right-handed alpha
Helix 22
22
A
561 578Right-handed alpha
Helix 23
23
A
580 599Right-handed alpha
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There are 6 sheets in PDB entry 2RGH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 192first strand
Strand 2
A
44 47parallel
Strand 3
A
21 24parallel
Strand 4
A
228 230parallel
Strand 5
A
423 427parallel
Strand 6
A
413 417anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
169 170anti-parallel
Strand 3
A
98 99anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 107first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
141 143anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 203first strand
Strand 2
A
206 214anti-parallel
Strand 3
A
220 224anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 276first strand
Strand 2
A
284 290anti-parallel
Strand 3
A
293 296anti-parallel
Strand 4
A
255 263anti-parallel
Strand 5
A
301 302anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 276first strand
Strand 2
A
284 290anti-parallel
Strand 3
A
293 296anti-parallel
Strand 4
A
255 263anti-parallel
Strand 5
A
340 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il