Analysis of interatomic Contacts of Structural Units in PDB entry:
2UWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2UWV entry

There are 3 chains in PDB entry 2UWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
ASP 11VAL 251
L
ALA 1GLY 281
M
ALA 1MET 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 2UWV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
H
11 35Right-handed alpha
Helix 2
2
H
103 108Right-handed alpha
Helix 3
3
H
109 113Right-handed 310
Helix 4
4
H
135 137Right-handed 310
Helix 5
5
H
194 196Right-handed 310
Helix 6
6
H
209 213Right-handed 310
Helix 7
7
H
226 244Right-handed alpha
Helix 8
8
H
245 248Right-handed 310
Helix 9
9
L
6 10Right-handed 310
Helix 10
10
L
31 57Right-handed alpha
Helix 11
11
L
70 74Right-handed 310
Helix 12
12
L
79 82Right-handed 310
Helix 13
13
L
83 111Right-handed alpha
Helix 14
14
L
115 133Right-handed alpha
Helix 15
15
L
133 140Right-handed alpha
Helix 16
16
L
141 145Right-handed 310
Helix 17
17
L
151 163Right-handed alpha
Helix 18
18
L
166 169Right-handed 310
Helix 19
19
L
170 199Right-handed alpha
Helix 20
20
L
208 221Right-handed alpha
Helix 21
21
L
224 250Right-handed alpha
Helix 22
22
L
258 263Right-handed alpha
Helix 23
23
L
263 268Right-handed alpha
Helix 24
24
M
25 28Right-handed 310
Helix 25
25
M
38 42Right-handed 310
Helix 26
26
M
52 78Right-handed alpha
Helix 27
27
M
81 88Right-handed alpha
Helix 28
28
M
98 102Right-handed 310
Helix 29
29
M
108 111Right-handed 310
Helix 30
30
M
112 139Right-handed alpha
Helix 31
31
M
144 162Right-handed alpha
Helix 32
32
M
162 169Right-handed alpha
Helix 33
33
M
170 174Right-handed 310
Helix 34
34
M
178 193Right-handed alpha
Helix 35
35
M
195 198Right-handed 310
Helix 36
36
M
199 226Right-handed alpha
Helix 37
37
M
227 230Right-handed 310
Helix 38
38
M
233 240Right-handed alpha
Helix 39
39
M
242 257Right-handed alpha
Helix 40
40
M
263 287Right-handed alpha
Helix 41
41
M
293 301Right-handed alpha
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There are 7 sheets in PDB entry 2UWV. Click on sheet of interest to get list of strands forming it: HA, HB, HC, HD, HE, LA, LB,

There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
62 66first strand
Strand 2
H
71 75anti-parallel
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There are 2 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
87 89first strand
Strand 2
H
98 100anti-parallel
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There are 5 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
131 133first strand
Strand 2
H
160 170anti-parallel
Strand 3
H
152 155anti-parallel
Strand 4
H
203 205parallel
Strand 5
H
197 198anti-parallel
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There are 4 strands in HD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
131 133first strand
Strand 2
H
160 170anti-parallel
Strand 3
H
175 183anti-parallel
Strand 4
H
188 192anti-parallel
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There are 2 strands in HE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
141 144first strand
Strand 2
M
11 13anti-parallel
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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
25 26first strand
Strand 2
L
29 30anti-parallel
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There are 2 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
65 66first strand
Strand 2
L
148 149anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il