Analysis of interatomic Contacts of Structural Units in PDB entry:
2V0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V0C entry

There is 1 chain in PDB entry 2V0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 813
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2V0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 21Right-handed alpha
Helix 2
2
A
49 70Right-handed alpha
Helix 3
3
A
83 93Right-handed alpha
Helix 4
4
A
96 115Right-handed alpha
Helix 5
5
A
120 124Right-handed 310
Helix 6
6
A
129 146Right-handed alpha
Helix 7
7
A
167 169Right-handed 310
Helix 8
8
A
196 198Right-handed 310
Helix 9
9
A
199 206Right-handed alpha
Helix 10
10
A
213 225Right-handed alpha
Helix 11
11
A
249 256Right-handed 310
Helix 12
12
A
265 272Right-handed alpha
Helix 13
13
A
273 275Right-handed 310
Helix 14
14
A
276 289Right-handed alpha
Helix 15
15
A
291 297Right-handed alpha
Helix 16
16
A
344 355Right-handed alpha
Helix 17
17
A
386 390Right-handed 310
Helix 18
18
A
393 408Right-handed alpha
Helix 19
19
A
448 452Right-handed 310
Helix 20
20
A
461 466Right-handed alpha
Helix 21
21
A
471 475Right-handed 310
Helix 22
22
A
476 480Right-handed alpha
Helix 23
23
A
499 505Right-handed alpha
Helix 24
24
A
506 511Right-handed alpha
Helix 25
25
A
522 530Right-handed alpha
Helix 26
26
A
538 542Right-handed 310
Helix 27
27
A
544 559Right-handed alpha
Helix 28
28
A
596 604Right-handed alpha
Helix 29
29
A
612 618Right-handed alpha
Helix 30
30
A
639 643Right-handed 310
Helix 31
31
A
647 655Right-handed alpha
Helix 32
32
A
656 667Right-handed alpha
Helix 33
33
A
677 704Right-handed alpha
Helix 34
34
A
710 714Right-handed 310
Helix 35
35
A
715 738Right-handed alpha
Helix 36
36
A
740 762Right-handed alpha
Helix 37
37
A
765 780Right-handed alpha
Helix 38
38
A
783 795Right-handed alpha
Helix 39
39
A
798 802Right-handed 310
Helix 40
40
A
808 813Right-handed 310
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There are 10 sheets in PDB entry 2V0C. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
34 39parallel
Strand 3
A
534 536parallel
Strand 4
A
571 572parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 166first strand
Strand 2
A
149 159anti-parallel
Strand 3
A
185 194anti-parallel
Strand 4
A
422 423anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
175 176anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 247first strand
Strand 2
A
226 235anti-parallel
Strand 3
A
411 417anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 312first strand
Strand 2
A
319 324anti-parallel
Strand 3
A
258 261parallel
Strand 4
A
336 339anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 363first strand
Strand 2
A
382 383anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 426first strand
Strand 2
A
497 498anti-parallel
Strand 3
A
432 433anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 446first strand
Strand 2
A
436 439anti-parallel
Strand 3
A
490 493anti-parallel
Strand 4
A
481 483anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
A
592 594anti-parallel
Strand 3
A
577 589anti-parallel
Strand 4
A
674 676parallel
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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
A
592 594anti-parallel
Strand 3
A
577 589anti-parallel
Strand 4
A
630 637anti-parallel
Strand 5
A
621 624anti-parallel
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