Analysis of interatomic Contacts of Structural Units in PDB entry:
2V10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V10 entry

There are 2 chains in PDB entry 2V10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 4ARG 340
O
 ASN 5ARG 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2V10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
55 60Right-handed alpha
Helix 2
2
C
65 69Right-handed 310
Helix 3
3
C
115 120Right-handed alpha
Helix 4
4
C
132 136Right-handed 310
Helix 5
5
C
136 140Right-handed 310
Helix 6
6
C
142 150Right-handed alpha
Helix 7
7
C
235 247Right-handed alpha
Helix 8
8
C
280 285Right-handed alpha
Helix 9
9
C
316 321Right-handed alpha
Helix 10
10
O
55 60Right-handed alpha
Helix 11
11
O
142 149Right-handed alpha
Helix 12
12
O
182 184Right-handed 310
Helix 13
13
O
235 247Right-handed alpha
Helix 14
14
O
260 265Right-handed 310
Helix 15
15
O
280 284Right-handed alpha
Helix 16
16
O
316 321Right-handed alpha
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There are 11 sheets in PDB entry 2V10. Click on sheet of interest to get list of strands forming it: CA, CB, CC, CD, CE, OA, OB, OC, OD, OE, OF,

There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 83first strand
Strand 2
C
86 99anti-parallel
Strand 3
C
19 26anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 83first strand
Strand 2
C
86 99anti-parallel
Strand 3
C
102 113anti-parallel
Strand 4
C
44 47parallel
Strand 5
C
126 129anti-parallel
Strand 6
C
31 38parallel
Strand 7
C
19 26anti-parallel
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There are 5 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 205first strand
Strand 2
C
221 225anti-parallel
Strand 3
C
313 315parallel
Strand 4
C
232 234anti-parallel
Strand 5
C
300 302parallel
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There are 4 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
213 216first strand
Strand 2
C
208 210anti-parallel
Strand 3
C
268 272anti-parallel
Strand 4
C
275 279anti-parallel
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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
256 258first strand
Strand 2
C
295 297anti-parallel
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There are 6 strands in OA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
8 11first strand
Strand 2
O
174 178anti-parallel
Strand 3
O
157 162anti-parallel
Strand 4
O
323 328anti-parallel
Strand 5
O
333 339anti-parallel
Strand 6
O
186 194anti-parallel
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There are 8 strands in OB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
13 15first strand
Strand 2
O
19 26anti-parallel
Strand 3
O
31 38anti-parallel
Strand 4
O
126 129parallel
Strand 5
O
44 47anti-parallel
Strand 6
O
108 113parallel
Strand 7
O
87 93anti-parallel
Strand 8
O
78 82anti-parallel
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There are 4 strands in OC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
13 15first strand
Strand 2
O
19 26anti-parallel
Strand 3
O
96 99anti-parallel
Strand 4
O
102 105anti-parallel
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There are 6 strands in OD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
213 216first strand
Strand 2
O
202 210anti-parallel
Strand 3
O
221 225anti-parallel
Strand 4
O
313 315parallel
Strand 5
O
232 234anti-parallel
Strand 6
O
300 302parallel
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There are 4 strands in OE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
213 216first strand
Strand 2
O
202 210anti-parallel
Strand 3
O
268 272anti-parallel
Strand 4
O
275 279anti-parallel
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There are 4 strands in OF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
249 250first strand
Strand 2
O
255 258anti-parallel
Strand 3
O
295 298anti-parallel
Strand 4
O
285 286anti-parallel
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