Analysis of interatomic Contacts of Structural Units in PDB entry:
2V5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V5I entry

There is 1 chain in PDB entry 2V5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 156VAL 708
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2V5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
156 166Right-handed alpha
Helix 2
2
A
173 175Right-handed 310
Helix 3
3
A
177 185Right-handed alpha
Helix 4
4
A
261 267Right-handed alpha
Helix 5
5
A
280 287Right-handed alpha
Helix 6
6
A
289 294Right-handed alpha
Helix 7
7
A
295 300Right-handed alpha
Helix 8
8
A
655 658Right-handed 310
Helix 9
9
A
671 675Right-handed 310
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There are 6 sheets in PDB entry 2V5I. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
188 191parallel
Strand 3
A
211 214parallel
Strand 4
A
234 236parallel
Strand 5
A
316 318parallel
Strand 6
A
336 345parallel
Strand 7
A
321 330parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
188 191parallel
Strand 3
A
211 214parallel
Strand 4
A
234 236parallel
Strand 5
A
316 318parallel
Strand 6
A
336 345parallel
Strand 7
A
365 373parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 248first strand
Strand 2
A
270 271anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 414first strand
Strand 2
A
417 418anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
602 607first strand
Strand 2
A
619 625anti-parallel
Strand 3
A
634 642anti-parallel
Strand 4
A
645 653anti-parallel
Strand 5
A
661 662anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 686first strand
Strand 2
A
689 695anti-parallel
Strand 3
A
701 705anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il