Analysis of interatomic Contacts of Structural Units in PDB entry:
2V62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V62 entry

There are 2 chains in PDB entry 2V62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 15GLN 330
B
 PHE 15GLN 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2V62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 56Right-handed 310
Helix 2
2
A
68 81Right-handed alpha
Helix 3
3
A
82 94Right-handed alpha
Helix 4
4
A
128 132Right-handed alpha
Helix 5
5
A
134 136Right-handed 310
Helix 6
6
A
139 160Right-handed alpha
Helix 7
7
A
168 170Right-handed 310
Helix 8
8
A
194 198Right-handed 310
Helix 9
9
A
205 209Right-handed 310
Helix 10
10
A
218 224Right-handed alpha
Helix 11
11
A
228 246Right-handed alpha
Helix 12
12
A
250 254Right-handed 310
Helix 13
13
A
256 270Right-handed alpha
Helix 14
14
A
272 279Right-handed alpha
Helix 15
15
A
285 297Right-handed alpha
Helix 16
16
A
305 314Right-handed alpha
Helix 17
17
B
52 56Right-handed 310
Helix 18
18
B
68 81Right-handed alpha
Helix 19
19
B
82 93Right-handed alpha
Helix 20
20
B
134 136Right-handed 310
Helix 21
21
B
139 160Right-handed alpha
Helix 22
22
B
168 170Right-handed 310
Helix 23
23
B
194 198Right-handed 310
Helix 24
24
B
205 209Right-handed 310
Helix 25
25
B
218 224Right-handed alpha
Helix 26
26
B
228 246Right-handed alpha
Helix 27
27
B
250 254Right-handed 310
Helix 28
28
B
256 270Right-handed alpha
Helix 29
29
B
272 277Right-handed alpha
Helix 30
30
B
285 297Right-handed alpha
Helix 31
31
B
305 314Right-handed alpha
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There are 6 sheets in PDB entry 2V62. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
A
28 34anti-parallel
Strand 3
A
43 48anti-parallel
Strand 4
A
58 64anti-parallel
Strand 5
A
115 122anti-parallel
Strand 6
A
103 110anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
172 175anti-parallel
Strand 3
A
182 184anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
191 192anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 22first strand
Strand 2
B
28 35anti-parallel
Strand 3
B
42 48anti-parallel
Strand 4
B
58 62anti-parallel
Strand 5
B
115 122anti-parallel
Strand 6
B
103 110anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 127first strand
Strand 2
B
172 175anti-parallel
Strand 3
B
182 184anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
191 192anti-parallel
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