Analysis of interatomic Contacts of Structural Units in PDB entry:
2V7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V7Y entry

There is 1 chain in PDB entry 2V7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2V7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 55Right-handed alpha
Helix 2
2
A
67 70Right-handed 310
Helix 3
3
A
85 106Right-handed alpha
Helix 4
4
A
121 135Right-handed alpha
Helix 5
5
A
145 153Right-handed alpha
Helix 6
6
A
154 158Right-handed 310
Helix 7
7
A
197 218Right-handed alpha
Helix 8
8
A
220 223Right-handed 310
Helix 9
9
A
224 242Right-handed alpha
Helix 10
10
A
271 278Right-handed alpha
Helix 11
11
A
278 284Right-handed alpha
Helix 12
12
A
285 297Right-handed alpha
Helix 13
13
A
299 303Right-handed 310
Helix 14
14
A
310 314Right-handed 310
Helix 15
15
A
315 327Right-handed alpha
Helix 16
16
A
338 353Right-handed alpha
Helix 17
17
A
417 420Right-handed 310
Helix 18
18
A
478 491Right-handed alpha
Helix 19
19
A
493 501Right-handed 310
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There are 8 sheets in PDB entry 2V7Y. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
4 9anti-parallel
Strand 4
A
111 116parallel
Strand 5
A
138 144parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
13 20anti-parallel
Strand 3
A
36 37anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
39 42anti-parallel
Strand 3
A
63 65anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
82 84anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 193first strand
Strand 2
A
173 181anti-parallel
Strand 3
A
161 168anti-parallel
Strand 4
A
305 309parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 258first strand
Strand 2
A
261 270anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 381first strand
Strand 2
A
367 372anti-parallel
Strand 3
A
404 412anti-parallel
Strand 4
A
421 429anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 395first strand
Strand 2
A
441 447anti-parallel
Strand 3
A
453 459anti-parallel
Strand 4
A
465 470anti-parallel
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