Analysis of interatomic Contacts of Structural Units in PDB entry:
2VE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VE7 entry

There are 4 chains in PDB entry 2VE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 79THR 1221
B
 MET 79GLN 1224
C
 LEU 4VAL 1193
D
 LEU 4TRP 1197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 2VE7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
88 106Right-handed alpha
Helix 2
2
A
114 118Right-handed 310
Helix 3
3
A
121 134Right-handed alpha
Helix 4
4
A
146 158Right-handed alpha
Helix 5
5
A
165 171Right-handed alpha
Helix 6
6
A
177 201Right-handed alpha
Helix 7
7
A
221 239Right-handed alpha
Helix 8
8
A
243 259Right-handed alpha
Helix 9
9
A
263 1126Right-handed alpha
Helix 10
10
A
1130 1142Right-handed alpha
Helix 11
11
A
1215 1220Right-handed alpha
Helix 12
12
B
88 106Right-handed alpha
Helix 13
13
B
121 135Right-handed alpha
Helix 14
14
B
146 158Right-handed alpha
Helix 15
15
B
165 171Right-handed alpha
Helix 16
16
B
177 199Right-handed alpha
Helix 17
17
B
221 237Right-handed alpha
Helix 18
18
B
243 258Right-handed alpha
Helix 19
19
B
271 1142Right-handed alpha
Helix 20
20
B
1194 1204Right-handed alpha
Helix 21
21
B
1206 1222Right-handed alpha
Helix 22
22
C
10 22Right-handed alpha
Helix 23
23
C
24 30Right-handed alpha
Helix 24
24
C
32 36Right-handed 310
Helix 25
25
C
41 58Right-handed alpha
Helix 26
26
C
61 65Right-handed 310
Helix 27
27
C
75 80Right-handed 310
Helix 28
28
C
82 99Right-handed alpha
Helix 29
29
C
105 111Right-handed alpha
Helix 30
30
C
113 145Right-handed alpha
Helix 31
31
C
146 165Right-handed alpha
Helix 32
32
C
1136 1148Right-handed alpha
Helix 33
33
C
1181 1191Right-handed alpha
Helix 34
34
D
10 22Right-handed alpha
Helix 35
35
D
25 31Right-handed alpha
Helix 36
36
D
32 36Right-handed 310
Helix 37
37
D
41 58Right-handed alpha
Helix 38
38
D
60 66Right-handed 310
Helix 39
39
D
75 80Right-handed 310
Helix 40
40
D
82 99Right-handed alpha
Helix 41
41
D
105 111Right-handed alpha
Helix 42
42
D
113 149Right-handed alpha
Helix 43
43
D
149 1123Right-handed alpha
Helix 44
44
A
79 1130Right-handed alpha
Helix 45
45
D
1131 1148Right-handed alpha
Helix 46
46
D
1181 1192Right-handed alpha
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There are 4 sheets in PDB entry 2VE7. Click on sheet of interest to get list of strands forming it: BA, CA, A, DB,

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1144 1147first strand
Strand 2
B
1154 1158anti-parallel
Strand 3
B
1170 1175anti-parallel
Strand 4
B
1182 1183anti-parallel
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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1150 1151first strand
Strand 2
C
1160 1163anti-parallel
Strand 3
C
1172 1175anti-parallel
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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1149 1152first strand
Strand 2
D
1160 1165anti-parallel
Strand 3
D
1174 1175anti-parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1149 1152first strand
Strand 2
D
1160 1165anti-parallel
Strand 3
D
1170 1171anti-parallel
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