Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2VM9 entry
There is 1 chain in PDB entry 2VM9
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
GLY 6 | ASN 257 |
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There is 1
helix in PDB entry 2VM9. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 10 |
14 | Right-handed alpha |
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There are
4 sheets in PDB entry 2VM9. Click on sheet of
interest to get list of strands forming it:
AA,
AB,
AC,
AD,
There are 6
strands in AA sheet. Click on strand of interest
for CSU analysis.