Analysis of interatomic Contacts of Structural Units in PDB entry:
2VUS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2VUS entry

There are 16 chains in PDB entry 2VUS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 3	LEU 352
B	GLN 3	LEU 352
C	GLN 3	LEU 352
D	GLN 3	LEU 352
E	GLN 3	LEU 352
F	GLN 3	LEU 352
G	GLN 3	LEU 352
H	GLN 3	LEU 352
I	THR 671	LEU 712
J	THR 671	LEU 712
K	THR 671	SER 711
L	THR 671	LEU 712
M	PRO 670	LEU 712
N	THR 671	LEU 712
O	THR 671	SER 711
P	THR 671	LEU 712

There are120 helices in PDB entry 2VUS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	15	29	Right-handed alpha
Helix 2	2	A	41	50	Right-handed alpha
Helix 3	3	A	63	71	Right-handed alpha
Helix 4	4	A	82	86	Right-handed 310
Helix 5	5	A	87	103	Right-handed alpha
Helix 6	6	A	115	119	Right-handed 310
Helix 7	7	A	129	142	Right-handed alpha
Helix 8	8	A	155	157	Right-handed 310
Helix 9	9	A	191	212	Right-handed alpha
Helix 10	10	A	224	234	Right-handed alpha
Helix 11	11	A	255	270	Right-handed alpha
Helix 12	12	A	279	283	Right-handed 310
Helix 13	13	A	318	325	Right-handed alpha
Helix 14	14	A	330	338	Right-handed alpha
Helix 15	15	A	338	346	Right-handed alpha
Helix 16	16	B	15	29	Right-handed alpha
Helix 17	17	B	41	50	Right-handed alpha
Helix 18	18	B	63	71	Right-handed alpha
Helix 19	19	B	82	86	Right-handed 310
Helix 20	20	B	87	103	Right-handed alpha
Helix 21	21	B	115	119	Right-handed 310
Helix 22	22	B	128	142	Right-handed alpha
Helix 23	23	B	155	157	Right-handed 310
Helix 24	24	B	191	212	Right-handed alpha
Helix 25	25	B	224	237	Right-handed alpha
Helix 26	26	B	255	270	Right-handed alpha
Helix 27	27	B	317	325	Right-handed alpha
Helix 28	28	B	330	338	Right-handed alpha
Helix 29	29	B	338	346	Right-handed alpha
Helix 30	30	C	15	29	Right-handed alpha
Helix 31	31	C	41	50	Right-handed alpha
Helix 32	32	C	63	71	Right-handed alpha
Helix 33	33	C	87	103	Right-handed alpha
Helix 34	34	C	115	119	Right-handed 310
Helix 35	35	C	128	141	Right-handed alpha
Helix 36	36	C	155	157	Right-handed 310
Helix 37	37	C	191	212	Right-handed alpha
Helix 38	38	C	224	237	Right-handed alpha
Helix 39	39	C	255	270	Right-handed alpha
Helix 40	40	C	279	283	Right-handed 310
Helix 41	41	C	318	325	Right-handed alpha
Helix 42	42	C	330	338	Right-handed alpha
Helix 43	43	C	338	346	Right-handed alpha
Helix 44	44	D	15	29	Right-handed alpha
Helix 45	45	D	41	48	Right-handed alpha
Helix 46	46	D	63	71	Right-handed alpha
Helix 47	47	D	87	103	Right-handed alpha
Helix 48	48	D	115	119	Right-handed 310
Helix 49	49	D	128	142	Right-handed alpha
Helix 50	50	D	155	157	Right-handed 310
Helix 51	51	D	191	212	Right-handed alpha
Helix 52	52	D	224	237	Right-handed alpha
Helix 53	53	D	255	271	Right-handed alpha
Helix 54	54	D	279	283	Right-handed 310
Helix 55	55	D	318	325	Right-handed alpha
Helix 56	56	D	330	338	Right-handed alpha
Helix 57	57	D	338	346	Right-handed alpha
Helix 58	58	E	15	29	Right-handed alpha
Helix 59	59	E	41	50	Right-handed alpha
Helix 60	60	E	63	71	Right-handed alpha
Helix 61	61	E	87	103	Right-handed alpha
Helix 62	62	E	115	119	Right-handed 310
Helix 63	63	E	128	141	Right-handed alpha
Helix 64	64	E	155	157	Right-handed 310
Helix 65	65	E	191	212	Right-handed alpha
Helix 66	66	E	224	237	Right-handed alpha
Helix 67	67	E	255	269	Right-handed alpha
Helix 68	68	E	279	283	Right-handed 310
Helix 69	69	E	318	325	Right-handed alpha
Helix 70	70	E	330	338	Right-handed alpha
Helix 71	71	E	338	347	Right-handed alpha
Helix 72	72	F	15	29	Right-handed alpha
Helix 73	73	F	41	50	Right-handed alpha
Helix 74	74	F	63	71	Right-handed alpha
Helix 75	75	F	87	103	Right-handed alpha
Helix 76	76	F	115	119	Right-handed 310
Helix 77	77	F	128	142	Right-handed alpha
Helix 78	78	F	155	157	Right-handed 310
Helix 79	79	F	191	212	Right-handed alpha
Helix 80	80	F	224	237	Right-handed alpha
Helix 81	81	F	255	269	Right-handed alpha
Helix 82	82	F	318	325	Right-handed alpha
Helix 83	83	F	330	338	Right-handed alpha
Helix 84	84	F	338	345	Right-handed alpha
Helix 85	85	G	15	29	Right-handed alpha
Helix 86	86	G	41	50	Right-handed alpha
Helix 87	87	G	63	71	Right-handed alpha
Helix 88	88	G	87	103	Right-handed alpha
Helix 89	89	G	115	119	Right-handed 310
Helix 90	90	G	128	141	Right-handed alpha
Helix 91	91	G	155	157	Right-handed 310
Helix 92	92	G	191	212	Right-handed alpha
Helix 93	93	G	224	237	Right-handed alpha
Helix 94	94	G	255	270	Right-handed alpha
Helix 95	95	G	279	283	Right-handed 310
Helix 96	96	G	318	325	Right-handed alpha
Helix 97	97	G	330	338	Right-handed alpha
Helix 98	98	G	338	346	Right-handed alpha
Helix 99	99	H	15	29	Right-handed alpha
Helix 100	100	H	41	50	Right-handed alpha
Helix 101	101	H	63	71	Right-handed alpha
Helix 102	102	H	87	103	Right-handed alpha
Helix 103	103	H	115	119	Right-handed 310
Helix 104	104	H	129	141	Right-handed alpha
Helix 105	105	H	155	157	Right-handed 310
Helix 106	106	H	191	212	Right-handed alpha
Helix 107	107	H	224	237	Right-handed alpha
Helix 108	108	H	255	269	Right-handed alpha
Helix 109	109	H	279	283	Right-handed 310
Helix 110	110	H	318	325	Right-handed alpha
Helix 111	111	H	330	338	Right-handed alpha
Helix 112	112	H	338	346	Right-handed alpha
Helix 113	113	I	695	705	Right-handed alpha
Helix 114	114	J	694	705	Right-handed alpha
Helix 115	115	K	695	705	Right-handed alpha
Helix 116	116	L	694	705	Right-handed alpha
Helix 117	117	M	695	705	Right-handed alpha
Helix 118	118	N	695	705	Right-handed alpha
Helix 119	119	O	695	705	Right-handed alpha
Helix 120	120	P	695	705	Right-handed alpha

There are 32 sheets in PDB entry 2VUS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C, EA, EB, EC, FA, FB, FC, GA, GB, GC, HA, HB, HC, IA, JA, KA, LA, MA, NA, OA, PA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	57	first strand
Strand 2	A	31	36	parallel
Strand 3	A	7	11	parallel
Strand 4	A	76	79	parallel
Strand 5	A	107	111	parallel
Strand 6	A	145	150	parallel
Strand 7	A	215	218	parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	153	first strand
Strand 2	A	187	190	parallel
Strand 3	A	221	223	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	169	first strand
Strand 2	A	175	179	anti-parallel
Strand 3	A	240	244	parallel

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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	57	first strand
Strand 2	B	31	36	parallel
Strand 3	B	7	11	parallel
Strand 4	B	76	79	parallel
Strand 5	B	107	112	parallel
Strand 6	B	145	150	parallel
Strand 7	B	215	218	parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	153	first strand
Strand 2	B	187	190	parallel
Strand 3	B	221	223	anti-parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	169	first strand
Strand 2	B	175	179	anti-parallel
Strand 3	B	240	244	parallel

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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	57	first strand
Strand 2	C	31	36	parallel
Strand 3	C	7	10	parallel
Strand 4	C	76	79	parallel
Strand 5	C	107	112	parallel
Strand 6	C	145	150	parallel
Strand 7	C	214	218	parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	153	first strand
Strand 2	C	187	190	parallel
Strand 3	C	221	223	anti-parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	169	first strand
Strand 2	C	175	179	anti-parallel
Strand 3	C	240	244	parallel

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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	57	first strand
Strand 2	D	31	36	parallel
Strand 3	D	7	10	parallel
Strand 4	D	76	79	parallel
Strand 5	D	107	111	parallel
Strand 6	D	145	150	parallel
Strand 7	D	215	218	parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	153	first strand
Strand 2	D	187	190	parallel
Strand 3	D	221	223	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	169	first strand
Strand 2	D	175	179	anti-parallel
Strand 3	D	240	244	parallel

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There are 7 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	57	first strand
Strand 2	E	31	36	parallel
Strand 3	E	7	10	parallel
Strand 4	E	76	79	parallel
Strand 5	E	107	111	parallel
Strand 6	E	145	150	parallel
Strand 7	E	214	218	parallel

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There are 3 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	153	first strand
Strand 2	E	187	190	parallel
Strand 3	E	221	223	anti-parallel

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There are 3 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	169	first strand
Strand 2	E	175	179	anti-parallel
Strand 3	E	240	244	parallel

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There are 7 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	57	first strand
Strand 2	F	31	36	parallel
Strand 3	F	7	10	parallel
Strand 4	F	76	79	parallel
Strand 5	F	107	111	parallel
Strand 6	F	145	150	parallel
Strand 7	F	215	218	parallel

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There are 3 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	152	153	first strand
Strand 2	F	187	190	parallel
Strand 3	F	221	223	anti-parallel

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There are 3 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	167	169	first strand
Strand 2	F	175	179	anti-parallel
Strand 3	F	240	244	parallel

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There are 7 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	57	first strand
Strand 2	G	31	36	parallel
Strand 3	G	7	10	parallel
Strand 4	G	76	79	parallel
Strand 5	G	107	111	parallel
Strand 6	G	145	150	parallel
Strand 7	G	214	218	parallel

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There are 3 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	153	first strand
Strand 2	G	187	190	parallel
Strand 3	G	221	223	anti-parallel

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There are 3 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	167	169	first strand
Strand 2	G	175	179	anti-parallel
Strand 3	G	240	244	parallel

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There are 7 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	57	first strand
Strand 2	H	31	36	parallel
Strand 3	H	7	10	parallel
Strand 4	H	76	79	parallel
Strand 5	H	107	111	parallel
Strand 6	H	145	150	parallel
Strand 7	H	214	218	parallel

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There are 3 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	187	190	parallel
Strand 3	H	221	223	anti-parallel

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There are 3 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	168	169	first strand
Strand 2	H	175	179	anti-parallel
Strand 3	H	240	244	parallel

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	684	686	first strand
Strand 2	I	692	694	anti-parallel

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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	685	686	first strand
Strand 2	J	692	693	anti-parallel

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There are 2 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	684	685	first strand
Strand 2	K	693	694	anti-parallel

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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	685	686	first strand
Strand 2	L	692	693	anti-parallel

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There are 2 strands in MA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	684	685	first strand
Strand 2	M	693	694	anti-parallel

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There are 2 strands in NA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	684	685	first strand
Strand 2	N	693	694	anti-parallel

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There are 2 strands in OA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	684	686	first strand
Strand 2	O	692	694	anti-parallel

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There are 2 strands in PA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	684	686	first strand
Strand 2	P	692	694	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2VUS

Analysis of interatomic Contacts of Structural Units in PDB entry:
2VUS