Analysis of interatomic Contacts of Structural Units in PDB entry:
2VUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2VUU entry

There are 16 chains in PDB entry 2VUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 3LEU 352
B
GLN 3LEU 352
C
GLN 3LEU 352
D
GLN 3LEU 352
E
GLN 3LEU 352
F
GLN 3LEU 352
G
GLN 3LEU 352
H
GLN 3LEU 352
I
THR 671LEU 712
J
THR 671LEU 712
K
THR 671LEU 712
L
THR 671LEU 712
M
THR 670LEU 711
N
THR 671LEU 712
O
THR 671SER 711
P
THR 671LEU 712
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are123 helices in PDB entry 2VUU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
15 28Right-handed alpha
Helix 2
2
A
41 50Right-handed alpha
Helix 3
3
A
63 72Right-handed alpha
Helix 4
4
A
82 86Right-handed 310
Helix 5
5
A
87 103Right-handed alpha
Helix 6
6
A
115 119Right-handed 310
Helix 7
7
A
128 142Right-handed alpha
Helix 8
8
A
155 157Right-handed 310
Helix 9
9
A
191 212Right-handed alpha
Helix 10
10
A
224 237Right-handed alpha
Helix 11
11
A
255 270Right-handed alpha
Helix 12
12
A
279 283Right-handed 310
Helix 13
13
A
318 325Right-handed alpha
Helix 14
14
A
330 338Right-handed alpha
Helix 15
15
A
338 346Right-handed alpha
Helix 16
16
B
15 29Right-handed alpha
Helix 17
17
B
41 50Right-handed alpha
Helix 18
18
B
63 71Right-handed alpha
Helix 19
19
B
87 103Right-handed alpha
Helix 20
20
B
115 119Right-handed 310
Helix 21
21
B
128 142Right-handed alpha
Helix 22
22
B
155 157Right-handed 310
Helix 23
23
B
191 212Right-handed alpha
Helix 24
24
B
224 237Right-handed alpha
Helix 25
25
B
255 270Right-handed alpha
Helix 26
26
B
317 325Right-handed alpha
Helix 27
27
B
330 338Right-handed alpha
Helix 28
28
B
338 346Right-handed alpha
Helix 29
29
C
15 29Right-handed alpha
Helix 30
30
C
41 50Right-handed alpha
Helix 31
31
C
63 72Right-handed alpha
Helix 32
32
C
82 86Right-handed 310
Helix 33
33
C
87 103Right-handed alpha
Helix 34
34
C
115 119Right-handed 310
Helix 35
35
C
128 142Right-handed alpha
Helix 36
36
C
155 157Right-handed 310
Helix 37
37
C
191 212Right-handed alpha
Helix 38
38
C
224 237Right-handed alpha
Helix 39
39
C
255 270Right-handed alpha
Helix 40
40
C
279 283Right-handed 310
Helix 41
41
C
317 325Right-handed alpha
Helix 42
42
C
330 338Right-handed alpha
Helix 43
43
C
338 347Right-handed alpha
Helix 44
44
D
15 29Right-handed alpha
Helix 45
45
D
41 50Right-handed alpha
Helix 46
46
D
63 72Right-handed alpha
Helix 47
47
D
82 86Right-handed 310
Helix 48
48
D
87 103Right-handed alpha
Helix 49
49
D
115 119Right-handed 310
Helix 50
50
D
128 142Right-handed alpha
Helix 51
51
D
155 157Right-handed 310
Helix 52
52
D
191 212Right-handed alpha
Helix 53
53
D
224 237Right-handed alpha
Helix 54
54
D
255 271Right-handed alpha
Helix 55
55
D
317 325Right-handed alpha
Helix 56
56
D
330 338Right-handed alpha
Helix 57
57
D
338 346Right-handed alpha
Helix 58
58
E
15 28Right-handed alpha
Helix 59
59
E
41 50Right-handed alpha
Helix 60
60
E
63 72Right-handed alpha
Helix 61
61
E
82 86Right-handed 310
Helix 62
62
E
87 103Right-handed alpha
Helix 63
63
E
115 119Right-handed 310
Helix 64
64
E
128 141Right-handed alpha
Helix 65
65
E
155 157Right-handed 310
Helix 66
66
E
191 212Right-handed alpha
Helix 67
67
E
224 237Right-handed alpha
Helix 68
68
E
255 270Right-handed alpha
Helix 69
69
E
279 283Right-handed 310
Helix 70
70
E
317 325Right-handed alpha
Helix 71
71
E
330 338Right-handed alpha
Helix 72
72
E
338 347Right-handed alpha
Helix 73
73
F
15 29Right-handed alpha
Helix 74
74
F
41 50Right-handed alpha
Helix 75
75
F
63 71Right-handed alpha
Helix 76
76
F
82 86Right-handed 310
Helix 77
77
F
87 103Right-handed alpha
Helix 78
78
F
115 119Right-handed 310
Helix 79
79
F
128 142Right-handed alpha
Helix 80
80
F
155 157Right-handed 310
Helix 81
81
F
191 212Right-handed alpha
Helix 82
82
F
224 237Right-handed alpha
Helix 83
83
F
255 270Right-handed alpha
Helix 84
84
F
318 325Right-handed alpha
Helix 85
85
F
330 338Right-handed alpha
Helix 86
86
F
338 346Right-handed alpha
Helix 87
87
G
15 29Right-handed alpha
Helix 88
88
G
41 50Right-handed alpha
Helix 89
89
G
63 71Right-handed alpha
Helix 90
90
G
82 86Right-handed 310
Helix 91
91
G
87 103Right-handed alpha
Helix 92
92
G
115 119Right-handed 310
Helix 93
93
G
128 142Right-handed alpha
Helix 94
94
G
155 157Right-handed 310
Helix 95
95
G
191 212Right-handed alpha
Helix 96
96
G
224 237Right-handed alpha
Helix 97
97
G
255 270Right-handed alpha
Helix 98
98
G
317 325Right-handed alpha
Helix 99
99
G
330 338Right-handed alpha
Helix 100
100
G
338 346Right-handed alpha
Helix 101
101
H
15 29Right-handed alpha
Helix 102
102
H
41 50Right-handed alpha
Helix 103
103
H
63 72Right-handed alpha
Helix 104
104
H
82 86Right-handed 310
Helix 105
105
H
87 103Right-handed alpha
Helix 106
106
H
115 119Right-handed 310
Helix 107
107
H
128 141Right-handed alpha
Helix 108
108
H
155 157Right-handed 310
Helix 109
109
H
191 212Right-handed alpha
Helix 110
110
H
224 237Right-handed alpha
Helix 111
111
H
255 270Right-handed alpha
Helix 112
112
H
279 283Right-handed 310
Helix 113
113
H
318 325Right-handed alpha
Helix 114
114
H
330 338Right-handed alpha
Helix 115
115
H
338 347Right-handed alpha
Helix 116
116
I
694 705Right-handed alpha
Helix 117
117
J
694 705Right-handed alpha
Helix 118
118
K
694 705Right-handed alpha
Helix 119
119
L
694 705Right-handed alpha
Helix 120
120
M
693 704Right-handed alpha
Helix 121
121
N
695 705Right-handed alpha
Helix 122
122
O
694 705Right-handed alpha
Helix 123
123
P
694 705Right-handed alpha
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There are 30 sheets in PDB entry 2VUU. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C, EA, EB, EC, FA, FB, FC, GA, GB, GC, HA, HB, HC, IA, JA, MA, NA, OA, PA,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 57first strand
Strand 2
A
31 36parallel
Strand 3
A
7 10parallel
Strand 4
A
76 79parallel
Strand 5
A
107 112parallel
Strand 6
A
145 150parallel
Strand 7
A
215 218parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
152 153first strand
Strand 2
A
187 190parallel
Strand 3
A
221 223anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
167 169first strand
Strand 2
A
175 179anti-parallel
Strand 3
A
240 244parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
53 57first strand
Strand 2
B
31 36parallel
Strand 3
B
7 11parallel
Strand 4
B
76 79parallel
Strand 5
B
107 111parallel
Strand 6
B
145 150parallel
Strand 7
B
215 218parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
152 153first strand
Strand 2
B
187 190parallel
Strand 3
B
221 223anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
167 169first strand
Strand 2
B
175 179anti-parallel
Strand 3
B
240 244parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
53 57first strand
Strand 2
C
31 36parallel
Strand 3
C
7 10parallel
Strand 4
C
76 79parallel
Strand 5
C
107 112parallel
Strand 6
C
145 150parallel
Strand 7
C
214 218parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
152 153first strand
Strand 2
C
187 190parallel
Strand 3
C
221 223anti-parallel
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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
168 169first strand
Strand 2
C
175 179anti-parallel
Strand 3
C
240 244parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
53 57first strand
Strand 2
D
31 36parallel
Strand 3
D
7 10parallel
Strand 4
D
76 79parallel
Strand 5
D
107 112parallel
Strand 6
D
145 150parallel
Strand 7
D
215 218parallel
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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
152 153first strand
Strand 2
D
187 190parallel
Strand 3
D
221 223anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
167 169first strand
Strand 2
D
175 179anti-parallel
Strand 3
D
240 244parallel
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There are 7 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
53 57first strand
Strand 2
E
31 36parallel
Strand 3
E
7 10parallel
Strand 4
E
76 79parallel
Strand 5
E
107 112parallel
Strand 6
E
145 150parallel
Strand 7
E
214 218parallel
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There are 3 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
152 153first strand
Strand 2
E
187 190parallel
Strand 3
E
221 223anti-parallel
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There are 3 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
168 169first strand
Strand 2
E
175 179anti-parallel
Strand 3
E
240 244parallel
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There are 7 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
53 57first strand
Strand 2
F
31 36parallel
Strand 3
F
7 10parallel
Strand 4
F
76 79parallel
Strand 5
F
107 111parallel
Strand 6
F
145 150parallel
Strand 7
F
214 218parallel
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There are 3 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
152 153first strand
Strand 2
F
187 190parallel
Strand 3
F
221 223anti-parallel
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There are 3 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
167 169first strand
Strand 2
F
175 179anti-parallel
Strand 3
F
240 244parallel
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There are 7 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
53 57first strand
Strand 2
G
31 36parallel
Strand 3
G
7 10parallel
Strand 4
G
76 79parallel
Strand 5
G
107 112parallel
Strand 6
G
145 150parallel
Strand 7
G
214 218parallel
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There are 3 strands in GB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
152 153first strand
Strand 2
G
187 190parallel
Strand 3
G
221 223anti-parallel
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There are 3 strands in GC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
168 169first strand
Strand 2
G
175 179anti-parallel
Strand 3
G
240 244parallel
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There are 7 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
53 57first strand
Strand 2
H
31 36parallel
Strand 3
H
7 10parallel
Strand 4
H
76 79parallel
Strand 5
H
107 112parallel
Strand 6
H
145 150parallel
Strand 7
H
214 218parallel
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There are 3 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
152 153first strand
Strand 2
H
187 190parallel
Strand 3
H
221 223anti-parallel
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There are 3 strands in HC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
167 169first strand
Strand 2
H
175 179anti-parallel
Strand 3
H
240 244parallel
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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
685 686first strand
Strand 2
I
692 693anti-parallel
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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
685 686first strand
Strand 2
J
692 693anti-parallel
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There are 2 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
684 685first strand
Strand 2
M
691 692anti-parallel
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There are 2 strands in NA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
684 686first strand
Strand 2
N
692 694anti-parallel
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There are 2 strands in OA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
685 686first strand
Strand 2
O
692 693anti-parallel
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There are 2 strands in PA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
685 686first strand
Strand 2
P
692 693anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il