Analysis of interatomic Contacts of Structural Units in PDB entry:
2W7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2W7P entry

There are 8 chains in PDB entry 2W7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 33ASP 521
B
 LYS 33ASP 521
E
 G 3 C 13
F
 C 2 C 4
F
 G 6 C 16
P
 G 1 C 13
T
 C 2 C 4
T
 G 6 C 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 2W7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 41Right-handed alpha
Helix 2
2
A
47 73Right-handed alpha
Helix 3
3
A
77 96Right-handed alpha
Helix 4
4
A
110 120Right-handed alpha
Helix 5
5
A
140 145Right-handed alpha
Helix 6
6
A
153 161Right-handed alpha
Helix 7
7
A
170 187Right-handed alpha
Helix 8
8
A
204 210Right-handed alpha
Helix 9
9
A
216 218Right-handed 310
Helix 10
10
A
289 303Right-handed alpha
Helix 11
11
A
316 327Right-handed alpha
Helix 12
12
A
338 347Right-handed alpha
Helix 13
13
A
351 354Right-handed 310
Helix 14
14
A
358 367Right-handed alpha
Helix 15
15
A
372 378Right-handed alpha
Helix 16
16
A
379 384Right-handed alpha
Helix 17
17
A
388 401Right-handed alpha
Helix 18
18
A
427 446Right-handed alpha
Helix 19
19
A
480 499Right-handed alpha
Helix 20
20
B
35 45Right-handed alpha
Helix 21
21
B
49 72Right-handed alpha
Helix 22
22
B
75 96Right-handed alpha
Helix 23
23
B
111 119Right-handed alpha
Helix 24
24
B
140 145Right-handed alpha
Helix 25
25
B
153 161Right-handed alpha
Helix 26
26
B
170 189Right-handed alpha
Helix 27
27
B
205 211Right-handed alpha
Helix 28
28
B
289 304Right-handed alpha
Helix 29
29
B
316 325Right-handed alpha
Helix 30
30
B
338 346Right-handed alpha
Helix 31
31
B
358 367Right-handed alpha
Helix 32
32
B
372 379Right-handed alpha
Helix 33
33
B
379 384Right-handed alpha
Helix 34
34
B
388 399Right-handed alpha
Helix 35
35
B
427 447Right-handed alpha
Helix 36
36
B
448 450Right-handed 310
Helix 37
37
B
480 499Right-handed alpha
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There are 7 sheets in PDB entry 2W7P. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 203first strand
Strand 2
A
103 108anti-parallel
Strand 3
A
309 314anti-parallel
Strand 4
A
332 334parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
128 131anti-parallel
Strand 3
A
165 167parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 222first strand
Strand 2
A
283 285anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 425first strand
Strand 2
A
506 514anti-parallel
Strand 3
A
455 462anti-parallel
Strand 4
A
469 473anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
B
199 202anti-parallel
Strand 3
B
103 108anti-parallel
Strand 4
B
309 314anti-parallel
Strand 5
B
332 334parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
136 138anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
415 425first strand
Strand 2
B
506 514anti-parallel
Strand 3
B
455 461anti-parallel
Strand 4
B
471 473anti-parallel
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