Analysis of interatomic Contacts of Structural Units in PDB entry:
2WEE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WEE entry

There are 4 chains in PDB entry 2WEE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLY 176
A
 VAL 178SER 194
B
 MET 1GLY 176
B
 VAL 178SER 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2WEE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 25Right-handed 310
Helix 2
2
A
33 44Right-handed alpha
Helix 3
3
A
56 64Right-handed alpha
Helix 4
4
A
81 90Right-handed alpha
Helix 5
5
A
110 121Right-handed alpha
Helix 6
6
A
122 124Right-handed 310
Helix 7
7
A
145 151Right-handed alpha
Helix 8
8
A
156 164Right-handed alpha
Helix 9
9
A
184 193Right-handed alpha
Helix 10
10
B
22 25Right-handed 310
Helix 11
11
B
33 43Right-handed alpha
Helix 12
12
B
56 64Right-handed alpha
Helix 13
13
B
83 90Right-handed alpha
Helix 14
14
B
110 121Right-handed alpha
Helix 15
15
B
122 124Right-handed 310
Helix 16
16
B
145 152Right-handed alpha
Helix 17
17
B
154 156Right-handed 310
Helix 18
18
B
157 163Right-handed alpha
Helix 19
19
B
184 194Right-handed alpha
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There are 4 sheets in PDB entry 2WEE. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
48 53parallel
Strand 3
A
5 12parallel
Strand 4
A
96 103parallel
Strand 5
A
134 142anti-parallel
Strand 6
A
126 131anti-parallel
Strand 7
A
169 173parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
31 32anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 73first strand
Strand 2
B
48 53parallel
Strand 3
B
5 12parallel
Strand 4
B
96 103parallel
Strand 5
B
134 142anti-parallel
Strand 6
B
126 131anti-parallel
Strand 7
B
169 173parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
31 32anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il