Analysis of interatomic Contacts of Structural Units in PDB entry:
2WJX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WJX entry

There are 3 chains in PDB entry 2WJX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 25THR 398
B
 ASN 25THR 398
C
 ASN 25THR 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 2WJX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 52Right-handed alpha
Helix 2
2
A
69 84Right-handed alpha
Helix 3
3
A
96 108Right-handed alpha
Helix 4
4
A
132 143Right-handed alpha
Helix 5
5
A
158 172Right-handed alpha
Helix 6
6
A
187 202Right-handed alpha
Helix 7
7
A
212 224Right-handed alpha
Helix 8
8
A
267 278Right-handed alpha
Helix 9
9
A
294 317Right-handed alpha
Helix 10
10
A
340 350Right-handed alpha
Helix 11
11
B
37 52Right-handed alpha
Helix 12
12
B
69 84Right-handed alpha
Helix 13
13
B
96 108Right-handed alpha
Helix 14
14
B
132 143Right-handed alpha
Helix 15
15
B
158 172Right-handed alpha
Helix 16
16
B
187 202Right-handed alpha
Helix 17
17
B
212 224Right-handed alpha
Helix 18
18
B
267 278Right-handed alpha
Helix 19
19
B
294 317Right-handed alpha
Helix 20
20
B
340 350Right-handed alpha
Helix 21
21
C
37 52Right-handed alpha
Helix 22
22
C
69 84Right-handed alpha
Helix 23
23
C
96 108Right-handed alpha
Helix 24
24
C
132 143Right-handed alpha
Helix 25
25
C
158 172Right-handed alpha
Helix 26
26
C
187 202Right-handed alpha
Helix 27
27
C
212 224Right-handed alpha
Helix 28
28
C
267 278Right-handed alpha
Helix 29
29
C
294 317Right-handed alpha
Helix 30
30
C
340 350Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 2WJX. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 65first strand
Strand 2
A
27 34parallel
Strand 3
A
88 90parallel
Strand 4
A
111 113parallel
Strand 5
A
125 127parallel
Back to list of sheets
Back to top of page

There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 179first strand
Strand 2
A
147 152parallel
Strand 3
A
206 210parallel
Strand 4
A
234 237parallel
Strand 5
A
256 261parallel
Strand 6
A
373 379anti-parallel
Strand 7
A
382 390anti-parallel
Strand 8
A
394 397anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
358 360anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 65first strand
Strand 2
B
27 34parallel
Strand 3
B
88 90parallel
Strand 4
B
111 113parallel
Strand 5
B
125 127parallel
Back to list of sheets
Back to top of page

There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 179first strand
Strand 2
B
147 152parallel
Strand 3
B
206 210parallel
Strand 4
B
234 237parallel
Strand 5
B
256 261parallel
Strand 6
B
373 379anti-parallel
Strand 7
B
382 390anti-parallel
Strand 8
B
394 397anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 355first strand
Strand 2
B
358 360anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 65first strand
Strand 2
C
27 34parallel
Strand 3
C
88 90parallel
Strand 4
C
111 113parallel
Strand 5
C
125 127parallel
Back to list of sheets
Back to top of page

There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
174 179first strand
Strand 2
C
147 152parallel
Strand 3
C
206 210parallel
Strand 4
C
234 237parallel
Strand 5
C
256 261parallel
Strand 6
C
372 379anti-parallel
Strand 7
C
382 390anti-parallel
Strand 8
C
394 397anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
353 355first strand
Strand 2
C
358 360anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il