Analysis of interatomic Contacts of Structural Units in PDB entry:
2WJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WJZ entry

There are 6 chains in PDB entry 2WJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLU 251
B
MET 1LEU 198
C
MET 1GLU 251
D
MET 1LEU 198
E
MET 1GLU 251
F
MET 1LEU 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 2WJZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
31 43Right-handed alpha
Helix 2
2
A
54 71Right-handed alpha
Helix 3
3
A
85 95Right-handed alpha
Helix 4
4
A
103 109Right-handed alpha
Helix 5
5
A
110 121Right-handed alpha
Helix 6
6
A
153 164Right-handed alpha
Helix 7
7
A
183 191Right-handed alpha
Helix 8
8
A
192 194Right-handed 310
Helix 9
9
A
206 216Right-handed alpha
Helix 10
10
A
224 229Right-handed alpha
Helix 11
11
A
233 244Right-handed alpha
Helix 12
12
B
13 24Right-handed alpha
Helix 13
13
B
54 63Right-handed alpha
Helix 14
14
B
66 76Right-handed alpha
Helix 15
15
B
84 89Right-handed alpha
Helix 16
16
B
179 181Right-handed 310
Helix 17
17
B
182 197Right-handed alpha
Helix 18
18
C
31 43Right-handed alpha
Helix 19
19
C
54 71Right-handed alpha
Helix 20
20
C
85 95Right-handed alpha
Helix 21
21
C
103 109Right-handed alpha
Helix 22
22
C
110 121Right-handed alpha
Helix 23
23
C
153 164Right-handed alpha
Helix 24
24
C
183 191Right-handed alpha
Helix 25
25
C
192 194Right-handed 310
Helix 26
26
C
206 217Right-handed alpha
Helix 27
27
C
224 229Right-handed alpha
Helix 28
28
C
233 244Right-handed alpha
Helix 29
29
D
13 24Right-handed alpha
Helix 30
30
D
54 63Right-handed alpha
Helix 31
31
D
66 76Right-handed alpha
Helix 32
32
D
84 89Right-handed alpha
Helix 33
33
D
179 181Right-handed 310
Helix 34
34
D
182 197Right-handed alpha
Helix 35
35
E
31 43Right-handed alpha
Helix 36
36
E
58 71Right-handed alpha
Helix 37
37
E
85 95Right-handed alpha
Helix 38
38
E
103 109Right-handed alpha
Helix 39
39
E
110 121Right-handed alpha
Helix 40
40
E
153 164Right-handed alpha
Helix 41
41
E
183 191Right-handed alpha
Helix 42
42
E
192 194Right-handed 310
Helix 43
43
E
206 216Right-handed alpha
Helix 44
44
E
224 229Right-handed alpha
Helix 45
45
E
233 244Right-handed alpha
Helix 46
46
F
13 24Right-handed alpha
Helix 47
47
F
54 63Right-handed alpha
Helix 48
48
F
66 76Right-handed alpha
Helix 49
49
F
84 89Right-handed alpha
Helix 50
50
F
179 181Right-handed 310
Helix 51
51
F
182 197Right-handed alpha
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There are 9 sheets in PDB entry 2WJZ. Click on sheet of interest to get list of strands forming it: AA, BA, BB, CA, A, DB, EA, FA, FB,

There are 12 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
5 12first strand
Strand 2
A
220 223parallel
Strand 3
A
198 201parallel
Strand 4
A
167 172parallel
Strand 5
A
125 134parallel
Strand 6
A
99 102parallel
Strand 7
A
77 80parallel
Strand 8
A
46 51parallel
Strand 9
A
5 12parallel
Strand 10
A
220 223parallel
Strand 11
A
198 201parallel
Strand 12
A
5 12first strand
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
31 35first strand
Strand 2
B
2 6parallel
Strand 3
B
45 48parallel
Strand 4
B
79 83parallel
Strand 5
B
172 175parallel
Strand 6
B
161 169anti-parallel
Strand 7
B
152 158anti-parallel
Strand 8
B
120 128anti-parallel
Strand 9
B
135 141anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
108 112first strand
Strand 2
B
143 147anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
16 17first strand
Strand 2
C
5 13anti-parallel
Strand 3
C
147 152first strand
Strand 4
C
137 142anti-parallel
Strand 5
C
125 134anti-parallel
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There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
31 35first strand
Strand 2
D
2 6parallel
Strand 3
D
45 48parallel
Strand 4
D
79 83parallel
Strand 5
D
172 175parallel
Strand 6
D
161 169anti-parallel
Strand 7
D
152 158anti-parallel
Strand 8
D
120 128anti-parallel
Strand 9
D
135 141anti-parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
108 112first strand
Strand 2
D
143 147anti-parallel
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There are 11 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
5 12first strand
Strand 2
E
220 223parallel
Strand 3
E
198 201parallel
Strand 4
E
167 172parallel
Strand 5
E
125 134parallel
Strand 6
E
99 102parallel
Strand 7
E
77 80parallel
Strand 8
E
46 51parallel
Strand 9
E
5 12parallel
Strand 10
E
220 223parallel
Strand 11
E
5 12parallel
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There are 9 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
31 35first strand
Strand 2
F
2 6parallel
Strand 3
F
45 48parallel
Strand 4
F
79 83parallel
Strand 5
F
172 175parallel
Strand 6
F
161 169anti-parallel
Strand 7
F
152 158anti-parallel
Strand 8
F
120 128anti-parallel
Strand 9
F
135 141anti-parallel
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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
108 112first strand
Strand 2
F
143 147anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il