Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WOA entry

There are 4 chains in PDB entry 2WOA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 105GLU 267
B
 MET 105GLU 267
C
 MET 105GLU 267
D
 GLY 106PRO 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2WOA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
126 143Right-handed alpha
Helix 2
2
A
211 220Right-handed alpha
Helix 3
3
A
251 256Right-handed alpha
Helix 4
4
B
126 143Right-handed alpha
Helix 5
5
B
211 220Right-handed alpha
Helix 6
6
B
244 248Right-handed 310
Helix 7
7
B
251 256Right-handed alpha
Helix 8
8
C
126 143Right-handed alpha
Helix 9
9
C
211 220Right-handed alpha
Helix 10
10
C
251 256Right-handed alpha
Helix 11
11
D
126 143Right-handed alpha
Helix 12
12
D
211 220Right-handed alpha
Helix 13
13
D
244 248Right-handed 310
Helix 14
14
D
251 256Right-handed alpha
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There are 4 sheets in PDB entry 2WOA. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
113 118parallel
Strand 3
A
159 164parallel
Strand 4
A
195 198parallel
Strand 5
A
182 184anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 151first strand
Strand 2
B
113 118parallel
Strand 3
B
159 164parallel
Strand 4
B
195 198parallel
Strand 5
B
182 184anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 151first strand
Strand 2
C
113 118parallel
Strand 3
C
159 164parallel
Strand 4
C
195 198parallel
Strand 5
C
182 184anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 151first strand
Strand 2
D
113 118parallel
Strand 3
D
159 164parallel
Strand 4
D
195 198parallel
Strand 5
D
182 184anti-parallel
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