Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WOQ entry

There is 1 chain in PDB entry 2WOQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5LEU 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2WOQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 20Right-handed alpha
Helix 2
2
A
22 29Right-handed alpha
Helix 3
3
A
35 37Right-handed 310
Helix 4
4
A
65 78Right-handed alpha
Helix 5
5
A
99 103Right-handed 310
Helix 6
6
A
107 119Right-handed alpha
Helix 7
7
A
150 167Right-handed alpha
Helix 8
8
A
181 192Right-handed alpha
Helix 9
9
A
212 218Right-handed alpha
Helix 10
10
A
228 232Right-handed 310
Helix 11
11
A
239 252Right-handed alpha
Helix 12
12
A
266 276Right-handed alpha
Helix 13
13
A
287 297Right-handed alpha
Helix 14
14
A
304 316Right-handed alpha
Helix 15
15
A
325 332Right-handed alpha
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There are 2 sheets in PDB entry 2WOQ. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
61 64anti-parallel
Strand 3
A
39 45parallel
Strand 4
A
82 87parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
171 174parallel
Strand 3
A
198 205parallel
Strand 4
A
256 260parallel
Strand 5
A
280 284parallel
Strand 6
A
322 323parallel
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