Analysis of interatomic Contacts of Structural Units in PDB entry:
2WUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WUU entry

There is 1 chain in PDB entry 2WUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11LEU 421
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2WUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
23 29Right-handed alpha
Helix 3
3
A
41 45Right-handed 310
Helix 4
4
A
65 80Right-handed alpha
Helix 5
5
A
93 102Right-handed alpha
Helix 6
6
A
107 111Right-handed 310
Helix 7
7
A
138 148Right-handed alpha
Helix 8
8
A
150 156Right-handed alpha
Helix 9
9
A
173 176Right-handed 310
Helix 10
10
A
179 195Right-handed alpha
Helix 11
11
A
223 230Right-handed alpha
Helix 12
12
A
236 240Right-handed 310
Helix 13
13
A
244 254Right-handed alpha
Helix 14
14
A
268 270Right-handed 310
Helix 15
15
A
271 284Right-handed alpha
Helix 16
16
A
293 302Right-handed alpha
Helix 17
17
A
355 370Right-handed alpha
Helix 18
18
A
382 387Right-handed 310
Helix 19
19
A
412 415Right-handed 310
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There are 3 sheets in PDB entry 2WUU. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
112 116anti-parallel
Strand 3
A
122 133anti-parallel
Strand 4
A
161 171anti-parallel
Strand 5
A
200 204parallel
Strand 6
A
400 404anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
318 332anti-parallel
Strand 3
A
308 315anti-parallel
Strand 4
A
265 266anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
318 332anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il