Analysis of interatomic Contacts of Structural Units in PDB entry:
2WVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WVO entry

There are 2 chains in PDB entry 2WVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2VAL 223
B
 SER 2VAL 223
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2WVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 10Right-handed alpha
Helix 2
2
A
13 24Right-handed alpha
Helix 3
3
A
32 36Right-handed 310
Helix 4
4
A
37 60Right-handed alpha
Helix 5
5
A
64 69Right-handed 310
Helix 6
6
A
74 105Right-handed alpha
Helix 7
7
A
106 111Right-handed 310
Helix 8
8
A
114 118Right-handed 310
Helix 9
9
A
119 137Right-handed alpha
Helix 10
10
A
152 173Right-handed alpha
Helix 11
11
A
176 188Right-handed alpha
Helix 12
12
A
193 205Right-handed alpha
Helix 13
13
A
208 219Right-handed alpha
Helix 14
14
A
220 222Right-handed 310
Helix 15
15
B
2 10Right-handed alpha
Helix 16
16
B
13 24Right-handed alpha
Helix 17
17
B
32 36Right-handed 310
Helix 18
18
B
37 60Right-handed alpha
Helix 19
19
B
64 69Right-handed 310
Helix 20
20
B
74 105Right-handed alpha
Helix 21
21
B
107 111Right-handed 310
Helix 22
22
B
114 118Right-handed 310
Helix 23
23
B
119 137Right-handed alpha
Helix 24
24
B
152 173Right-handed alpha
Helix 25
25
B
176 189Right-handed alpha
Helix 26
26
B
193 205Right-handed alpha
Helix 27
27
B
208 223Right-handed alpha
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There are 2 sheets in PDB entry 2WVO. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
148 150parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 30first strand
Strand 2
B
148 150parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il