Analysis of interatomic Contacts of Structural Units in PDB entry:
2WXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WXJ entry

There is 1 chain in PDB entry 2WXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 109TRP 1027
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 39 helices in PDB entry 2WXJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
111 122Right-handed alpha
Helix 2
2
A
125 130Right-handed alpha
Helix 3
3
A
133 156Right-handed alpha
Helix 4
4
A
158 167Right-handed alpha
Helix 5
5
A
212 228Right-handed alpha
Helix 6
6
A
235 237Right-handed 310
Helix 7
7
A
255 258Right-handed 310
Helix 8
8
A
259 269Right-handed alpha
Helix 9
9
A
279 289Right-handed alpha
Helix 10
10
A
382 384Right-handed 310
Helix 11
11
A
487 494Right-handed alpha
Helix 12
12
A
511 516Right-handed alpha
Helix 13
13
A
524 534Right-handed alpha
Helix 14
14
A
534 542Right-handed alpha
Helix 15
15
A
545 551Right-handed alpha
Helix 16
16
A
557 569Right-handed alpha
Helix 17
17
A
575 583Right-handed alpha
Helix 18
18
A
589 601Right-handed alpha
Helix 19
19
A
604 618Right-handed alpha
Helix 20
20
A
619 622Right-handed 310
Helix 21
21
A
627 640Right-handed alpha
Helix 22
22
A
640 653Right-handed alpha
Helix 23
23
A
660 675Right-handed alpha
Helix 24
24
A
675 703Right-handed alpha
Helix 25
25
A
707 720Right-handed alpha
Helix 26
26
A
721 728Right-handed alpha
Helix 27
27
A
746 749Right-handed 310
Helix 28
28
A
765 773Right-handed 310
Helix 29
29
A
784 803Right-handed alpha
Helix 30
30
A
834 838Right-handed alpha
Helix 31
31
A
850 852Right-handed 310
Helix 32
32
A
853 863Right-handed alpha
Helix 33
33
A
866 889Right-handed alpha
Helix 34
34
A
935 943Right-handed alpha
Helix 35
35
A
949 970Right-handed alpha
Helix 36
36
A
970 982Right-handed alpha
Helix 37
37
A
983 985Right-handed 310
Helix 38
38
A
991 1002Right-handed alpha
Helix 39
39
A
1007 1026Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 2WXJ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
202 208first strand
Strand 2
A
189 196anti-parallel
Strand 3
A
273 278parallel
Strand 4
A
239 243anti-parallel
Strand 5
A
249 250anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
370 380first strand
Strand 2
A
322 330anti-parallel
Strand 3
A
470 475anti-parallel
Strand 4
A
435 440anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
352 353first strand
Strand 2
A
340 349anti-parallel
Strand 3
A
389 397anti-parallel
Strand 4
A
416 424anti-parallel
Strand 5
A
442 443anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
352 353first strand
Strand 2
A
363 364anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
731 733first strand
Strand 2
A
736 741anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
743 744first strand
Strand 2
A
759 764anti-parallel
Strand 3
A
750 751anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
743 744first strand
Strand 2
A
759 764anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
831 833first strand
Strand 2
A
899 902anti-parallel
Strand 3
A
907 909anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il