Analysis of interatomic Contacts of Structural Units in PDB entry:
2X5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2X5N entry

There is 1 chain in PDB entry 2X5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 2ALA 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 2X5N. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
13 18Right-handed 310
Helix 2
2
A
24 44Right-handed alpha
Helix 3
3
A
68 77Right-handed alpha
Helix 4
4
A
86 100Right-handed alpha
Helix 5
5
A
121 135Right-handed alpha
Helix 6
6
A
151 161Right-handed alpha
Helix 7
7
A
177 184Right-handed alpha
Back to top of page

There is 1 sheet ( AA) in PDB entry 2X5N.

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
61 66first strand
Strand 2
A
48 53anti-parallel
Strand 3
A
4 10parallel
Strand 4
A
107 114parallel
Strand 5
A
137 144parallel
Strand 6
A
167 171parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il