Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2X7R entry
There are 6 chains in PDB entry 2X7R
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
ARG 542 | ILE 580 |
B
|
MET 623 | LYS 665 |
C
|
ASP 624 | TYR 681 |
D
|
SER 534 | LEU 581 |
E
|
ASP 624 | ASN 677 |
N
|
GLY 531 | LEU 581 |
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There are 8
helices in PDB entry 2X7R. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 543 |
580 | Right-handed alpha |
Helix 2 |
2 | B
| 623 |
665 | Right-handed alpha |
Helix 3 |
3 | C
| 626 |
678 | Right-handed alpha |
Helix 4 |
4 | D
| 534 |
541 | Right-handed alpha |
Helix 5 |
5 | D
| 542 |
578 | Right-handed alpha |
Helix 6 |
6 | E
| 625 |
669 | Right-handed alpha |
Helix 7 |
7 | E
| 670 |
675 | Right-handed alpha |
Helix 8 |
8 | N
| 534 |
578 | Right-handed alpha |
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There are no sheets in PDB entry
2X7R
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il