Analysis of interatomic Contacts of Structural Units in PDB entry:
2XSD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XSD entry

There are 3 chains in PDB entry 2XSD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
A 201 A 211
B
C 202 A 212
C
ALA 247PRO 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2XSD. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
C
249 267Right-handed alpha
Helix 2
2
C
270 283Right-handed alpha
Helix 3
3
C
287 296Right-handed alpha
Helix 4
4
C
300 319Right-handed alpha
Helix 5
5
C
345 359Right-handed alpha
Helix 6
6
C
363 375Right-handed alpha
Helix 7
7
C
377 393Right-handed alpha
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There are no sheets in PDB entry 2XSD

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il