Analysis of interatomic Contacts of Structural Units in PDB entry:
2YEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YEV entry

There are 4 chains in PDB entry 2YEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 12TRP 791
B
 ALA 19PHE 337
C
 VAL 2HIS 64
D
 TRP 12ARG 102
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 2YEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 21Right-handed alpha
Helix 2
2
A
23 53Right-handed alpha
Helix 3
3
A
62 81Right-handed alpha
Helix 4
4
A
81 86Right-handed alpha
Helix 5
5
A
88 100Right-handed alpha
Helix 6
6
A
106 127Right-handed alpha
Helix 7
7
A
128 130Right-handed 310
Helix 8
8
A
144 149Right-handed alpha
Helix 9
9
A
152 181Right-handed alpha
Helix 10
10
A
187 191Right-handed 310
Helix 11
11
A
192 209Right-handed alpha
Helix 12
12
A
209 226Right-handed alpha
Helix 13
13
A
231 235Right-handed 310
Helix 14
14
A
237 250Right-handed alpha
Helix 15
15
A
250 273Right-handed alpha
Helix 16
16
A
278 293Right-handed alpha
Helix 17
17
A
296 301Right-handed 310
Helix 18
18
A
307 321Right-handed alpha
Helix 19
19
A
321 337Right-handed alpha
Helix 20
20
A
344 369Right-handed alpha
Helix 21
21
A
369 377Right-handed alpha
Helix 22
22
A
379 391Right-handed alpha
Helix 23
23
A
393 411Right-handed alpha
Helix 24
24
A
415 443Right-handed alpha
Helix 25
25
A
458 491Right-handed alpha
Helix 26
26
A
503 508Right-handed 310
Helix 27
27
A
529 537Right-handed alpha
Helix 28
28
A
545 549Right-handed 310
Helix 29
29
A
556 575Right-handed alpha
Helix 30
30
A
579 598Right-handed alpha
Helix 31
31
A
615 645Right-handed alpha
Helix 32
32
A
656 684Right-handed alpha
Helix 33
33
A
685 716Right-handed alpha
Helix 34
34
A
723 757Right-handed alpha
Helix 35
35
A
764 789Right-handed alpha
Helix 36
36
B
29 36Right-handed alpha
Helix 37
37
B
37 64Right-handed alpha
Helix 38
38
B
80 110Right-handed alpha
Helix 39
39
B
204 207Right-handed 310
Helix 40
40
B
216 230Right-handed alpha
Helix 41
41
B
236 247Right-handed alpha
Helix 42
42
B
268 272Right-handed 310
Helix 43
43
B
283 293Right-handed alpha
Helix 44
44
B
294 297Right-handed 310
Helix 45
45
B
310 324Right-handed alpha
Helix 46
46
B
330 334Right-handed 310
Helix 47
47
C
1 23Right-handed alpha
Helix 48
48
C
23 28Right-handed alpha
Helix 49
49
C
33 60Right-handed alpha
Helix 50
50
D
12 21Right-handed alpha
Helix 51
51
D
23 54Right-handed alpha
Helix 52
52
D
62 81Right-handed alpha
Helix 53
53
D
81 86Right-handed alpha
Helix 54
54
D
88 100Right-handed alpha
Helix 55
55
D
106 127Right-handed alpha
Helix 56
56
D
128 130Right-handed 310
Helix 57
57
D
144 149Right-handed alpha
Helix 58
58
D
152 181Right-handed alpha
Helix 59
59
D
187 191Right-handed 310
Helix 60
60
D
192 209Right-handed alpha
Helix 61
61
D
209 226Right-handed alpha
Helix 62
62
D
231 235Right-handed 310
Helix 63
63
D
237 250Right-handed alpha
Helix 64
64
D
250 273Right-handed alpha
Helix 65
65
D
278 293Right-handed alpha
Helix 66
66
D
296 301Right-handed 310
Helix 67
67
D
307 321Right-handed alpha
Helix 68
68
D
321 337Right-handed alpha
Helix 69
69
D
344 369Right-handed alpha
Helix 70
70
D
369 377Right-handed alpha
Helix 71
71
D
379 391Right-handed alpha
Helix 72
72
D
393 411Right-handed alpha
Helix 73
73
D
415 443Right-handed alpha
Helix 74
74
D
458 491Right-handed alpha
Helix 75
75
D
503 508Right-handed 310
Helix 76
76
D
529 537Right-handed alpha
Helix 77
77
D
545 549Right-handed 310
Helix 78
78
D
556 575Right-handed alpha
Helix 79
79
D
579 598Right-handed alpha
Helix 80
80
D
615 645Right-handed alpha
Helix 81
81
D
656 682Right-handed alpha
Helix 82
82
D
685 716Right-handed alpha
Helix 83
83
D
723 756Right-handed alpha
Helix 84
84
D
764 789Right-handed alpha
Helix 85
85
E
29 36Right-handed alpha
Helix 86
86
E
37 64Right-handed alpha
Helix 87
87
E
80 110Right-handed alpha
Helix 88
88
E
204 207Right-handed 310
Helix 89
89
E
216 230Right-handed alpha
Helix 90
90
E
236 247Right-handed alpha
Helix 91
91
E
268 272Right-handed 310
Helix 92
92
E
283 293Right-handed alpha
Helix 93
93
E
294 297Right-handed 310
Helix 94
94
E
310 324Right-handed alpha
Helix 95
95
E
330 334Right-handed 310
Helix 96
96
F
1 23Right-handed alpha
Helix 97
97
F
23 28Right-handed alpha
Helix 98
98
F
33 62Right-handed alpha
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There are 6 sheets in PDB entry 2YEV. Click on sheet of interest to get list of strands forming it: BA, BB, BC, EA, EB, EC,

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 140first strand
Strand 2
B
127 132anti-parallel
Strand 3
B
117 124anti-parallel
Strand 4
B
151 157parallel
Strand 5
B
181 185anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 146first strand
Strand 2
B
209 215parallel
Strand 3
B
191 197anti-parallel
Strand 4
B
162 166anti-parallel
Strand 5
B
170 175anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
274 275first strand
Strand 2
B
280 281anti-parallel
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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
137 140first strand
Strand 2
E
127 132anti-parallel
Strand 3
E
117 124anti-parallel
Strand 4
E
151 157parallel
Strand 5
E
181 185anti-parallel
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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
142 146first strand
Strand 2
E
209 215parallel
Strand 3
E
191 197anti-parallel
Strand 4
E
162 165anti-parallel
Strand 5
E
173 175anti-parallel
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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
274 275first strand
Strand 2
E
280 281anti-parallel
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