Analysis of interatomic Contacts of Structural Units in PDB entry:
2YW7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YW7 entry

There are 10 chains in PDB entry 2YW7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 11LEU 156
B
ASP 11HIS 155
C
ASP 11GLU 157
D
ASP 11HIS 155
E
ASP 11HIS 155
F
ASP 11LEU 156
G
LYS 13LEU 156
H
LYS 12GLU 157
I
LYS 12LEU 156
J
LYS 12GLU 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 2YW7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 40Right-handed alpha
Helix 2
2
A
46 75Right-handed alpha
Helix 3
3
A
82 89Right-handed alpha
Helix 4
4
A
102 127Right-handed alpha
Helix 5
5
A
131 153Right-handed alpha
Helix 6
6
B
13 42Right-handed alpha
Helix 7
7
B
47 75Right-handed alpha
Helix 8
8
B
101 128Right-handed alpha
Helix 9
9
B
131 153Right-handed alpha
Helix 10
10
C
12 41Right-handed alpha
Helix 11
11
C
46 75Right-handed alpha
Helix 12
12
C
84 89Right-handed alpha
Helix 13
13
C
102 128Right-handed alpha
Helix 14
14
C
131 155Right-handed alpha
Helix 15
15
D
12 40Right-handed alpha
Helix 16
16
D
47 76Right-handed alpha
Helix 17
17
D
84 89Right-handed alpha
Helix 18
18
D
102 127Right-handed alpha
Helix 19
19
D
134 153Right-handed alpha
Helix 20
20
E
11 42Right-handed alpha
Helix 21
21
E
47 75Right-handed alpha
Helix 22
22
E
82 88Right-handed alpha
Helix 23
23
E
101 128Right-handed alpha
Helix 24
24
E
131 153Right-handed alpha
Helix 25
25
F
12 42Right-handed alpha
Helix 26
26
F
47 75Right-handed alpha
Helix 27
27
F
82 89Right-handed alpha
Helix 28
28
F
101 128Right-handed alpha
Helix 29
29
F
131 153Right-handed alpha
Helix 30
30
G
16 41Right-handed alpha
Helix 31
31
G
47 75Right-handed alpha
Helix 32
32
G
82 90Right-handed alpha
Helix 33
33
G
102 128Right-handed alpha
Helix 34
34
G
131 154Right-handed alpha
Helix 35
35
H
13 40Right-handed alpha
Helix 36
36
H
46 74Right-handed alpha
Helix 37
37
H
83 88Right-handed alpha
Helix 38
38
H
101 127Right-handed alpha
Helix 39
39
H
133 154Right-handed alpha
Helix 40
40
I
13 18Right-handed alpha
Helix 41
41
I
18 40Right-handed alpha
Helix 42
42
I
46 68Right-handed alpha
Helix 43
43
I
68 75Right-handed alpha
Helix 44
44
I
82 89Right-handed alpha
Helix 45
45
I
101 126Right-handed alpha
Helix 46
46
I
132 136Right-handed 310
Helix 47
47
I
137 153Right-handed alpha
Helix 48
48
J
13 41Right-handed alpha
Helix 49
49
J
47 76Right-handed alpha
Helix 50
50
J
82 90Right-handed alpha
Helix 51
51
J
101 126Right-handed alpha
Helix 52
52
J
131 154Right-handed alpha
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There are 3 sheets in PDB entry 2YW7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
42 43first strand
Strand 2
A
100 101parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
42 43first strand
Strand 2
C
100 101parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
42 43first strand
Strand 2
G
100 101parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il